BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042316
         (252 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001176302.1| Os11g0106066 [Oryza sativa Japonica Group] g...    58   7e-07

>ref|NP_001176302.1| Os11g0106066 [Oryza sativa Japonica Group] gi|77548275|gb|ABA91072.1|
            retrotransposon protein, putative, unclassified [Oryza
            sativa Japonica Group] gi|255679693|dbj|BAH95030.1|
            Os11g0106066 [Oryza sativa Japonica Group]
          Length = 1690

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 7/90 (7%)
 Frame = -2

Query: 251  EKDGQLTVKSVYKFFSRNLGDSQGNEHSF-------WNYICHINTAQRVKLFLWKVVRNA 93
            +K G+ +V+S Y    R L +++G+  SF       W+ I      Q++K+F WKV  N 
Sbjct: 1494 DKSGRFSVRSAYNLACR-LANTEGSSSSFALHSRKSWDLIWKCKLPQKIKIFAWKVASNC 1552

Query: 92   LPTIENLRSRNIIETSICPR*NNQVESIDH 3
            L T++N R R ++ + IC   N +VE+  H
Sbjct: 1553 LATMDNKRKRKLVNSDICIICNREVENSVH 1582