BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042303
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320370.1| dehydroquinate dehydratase/ shikimate dehydr...    82   5e-14
ref|XP_002520694.1| shikimate dehydrogenase, putative [Ricinus c...    74   1e-11
ref|XP_001761240.1| predicted protein [Physcomitrella patens sub...    63   3e-08
ref|XP_002270188.1| PREDICTED: bifunctional 3-dehydroquinate deh...    60   2e-07
ref|XP_002328402.1| dehydroquinate dehydratase/ shikimate dehydr...    60   2e-07

>ref|XP_002320370.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
           trichocarpa] gi|222861143|gb|EEE98685.1| dehydroquinate
           dehydratase/ shikimate dehydrogenase [Populus
           trichocarpa]
          Length = 504

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 45/81 (55%), Positives = 58/81 (71%), Gaps = 6/81 (7%)
 Frame = -1

Query: 233 LICTTLQCKTVQEMVTSMDTAKTEGADLAELRIDSLSVFDILLDLEKLIKQKSLPVIVSF 54
           L+CT L+C+T  EM++SM  A+TEGADL ELR+DSLS F    ++EKLIKQ++LP IVSF
Sbjct: 8   LVCTPLECETAGEMLSSMKRAETEGADLTELRLDSLS-FSHNSEVEKLIKQRTLPSIVSF 66

Query: 53  RL------GGKENKRTCFRVL 9
           RL        K+ K TC +VL
Sbjct: 67  RLEPSRISSNKDRKNTCLQVL 87


>ref|XP_002520694.1| shikimate dehydrogenase, putative [Ricinus communis]
           gi|223540079|gb|EEF41656.1| shikimate dehydrogenase,
           putative [Ricinus communis]
          Length = 515

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 39/81 (48%), Positives = 56/81 (69%), Gaps = 6/81 (7%)
 Frame = -1

Query: 233 LICTTLQCKTVQEMVTSMDTAKTEGADLAELRIDSLSVFDILLDLEKLIKQKSLPVIVSF 54
           L+CT L+C+T  EM++ M+ A+ EGADL ELR+DS+S F  +  +EKLIK ++LP IVSF
Sbjct: 8   LVCTPLECETAGEMLSCMEKARGEGADLVELRVDSMS-FSHISQVEKLIKLRTLPAIVSF 66

Query: 53  R------LGGKENKRTCFRVL 9
           R          ++K+TC +VL
Sbjct: 67  RPKTSKISSNGDSKKTCLQVL 87


>ref|XP_001761240.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162687580|gb|EDQ73962.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 519

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 32/61 (52%), Positives = 42/61 (68%)
 Frame = -1

Query: 233 LICTTLQCKTVQEMVTSMDTAKTEGADLAELRIDSLSVFDILLDLEKLIKQKSLPVIVSF 54
           LIC  L  KTV++M+  ++ AK  GAD+AELR+D +S FD   DL  L+K K LPVIV+ 
Sbjct: 8   LICVPLTAKTVKKMLFQLELAKESGADVAELRVDLISGFDAAADLPVLLKDKPLPVIVTP 67

Query: 53  R 51
           R
Sbjct: 68  R 68


>ref|XP_002270188.1| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
           dehydrogenase, chloroplastic [Vitis vinifera]
           gi|298204990|emb|CBI34297.3| unnamed protein product
           [Vitis vinifera]
          Length = 531

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 7/76 (9%)
 Frame = -1

Query: 233 LICTTLQCKTVQEMVTSMDTAKTEGADLAELRIDSLSVFDILLDLEKLIKQKSLPVIVSF 54
           L+CT L   TV++M+T M  AK  GAD+ E+R+D L  F    DL+ LIKQ  LP +V++
Sbjct: 24  LLCTPLMGTTVEQMLTEMRKAKEIGADIVEIRLDCLRNFSPAQDLQILIKQSPLPTLVTY 83

Query: 53  R-------LGGKENKR 27
           R         G ENKR
Sbjct: 84  RPIWEGGQYEGDENKR 99


>ref|XP_002328402.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
           trichocarpa] gi|222838117|gb|EEE76482.1| dehydroquinate
           dehydratase/ shikimate dehydrogenase [Populus
           trichocarpa]
          Length = 518

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/61 (42%), Positives = 42/61 (68%)
 Frame = -1

Query: 233 LICTTLQCKTVQEMVTSMDTAKTEGADLAELRIDSLSVFDILLDLEKLIKQKSLPVIVSF 54
           ++C  L  ++V++MV  M +AK +GAD+ E+R+D +S F    DLE +I+ K LPVI+ +
Sbjct: 12  MVCAPLMAQSVEQMVIDMHSAKAQGADVVEVRLDCISKFQPRQDLETIIRNKPLPVIIVY 71

Query: 53  R 51
           R
Sbjct: 72  R 72