BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042290
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26657.3| unnamed protein product [Vitis vinifera]              194   8e-48
ref|XP_002279440.1| PREDICTED: mutS protein homolog 5-like [Viti...   194   8e-48
ref|XP_004149586.1| PREDICTED: DNA mismatch repair protein MSH5-...   192   3e-47
ref|XP_002883246.1| hypothetical protein ARALYDRAFT_479572 [Arab...   175   3e-42
ref|NP_188683.3| DNA mismatch repair protein MSH5 [Arabidopsis t...   170   1e-40

>emb|CBI26657.3| unnamed protein product [Vitis vinifera]
          Length = 793

 Score =  194 bits (492), Expect = 8e-48
 Identities = 93/117 (79%), Positives = 105/117 (89%)
 Frame = -2

Query: 352 LDELRKIYEELPDLLEEVSSIEVARHPRLRADKLAPCIVYIHQTGYLLCIFEEQLDESTL 173
           LDELR+IYEELP+ LEEVSS+E+AR P     KL PCIVYIHQ GYL+CIFE++LDE+TL
Sbjct: 362 LDELRQIYEELPEFLEEVSSLELARLPHFCGGKLVPCIVYIHQIGYLMCIFEDKLDETTL 421

Query: 172 EELQDFEFAFSDGEGEIKKYFYRTPKTRELDNLLGDIYHKILDMERAIIRDLVSHIL 2
           E+LQDFEFAFSDG+G+ KK+FYRT KTRELDNLLGDIYHKILDMERAI RDLVSHIL
Sbjct: 422 EKLQDFEFAFSDGDGDTKKFFYRTSKTRELDNLLGDIYHKILDMERAITRDLVSHIL 478


>ref|XP_002279440.1| PREDICTED: mutS protein homolog 5-like [Vitis vinifera]
          Length = 807

 Score =  194 bits (492), Expect = 8e-48
 Identities = 93/117 (79%), Positives = 105/117 (89%)
 Frame = -2

Query: 352 LDELRKIYEELPDLLEEVSSIEVARHPRLRADKLAPCIVYIHQTGYLLCIFEEQLDESTL 173
           LDELR+IYEELP+ LEEVSS+E+AR P     KL PCIVYIHQ GYL+CIFE++LDE+TL
Sbjct: 376 LDELRQIYEELPEFLEEVSSLELARLPHFCGGKLVPCIVYIHQIGYLMCIFEDKLDETTL 435

Query: 172 EELQDFEFAFSDGEGEIKKYFYRTPKTRELDNLLGDIYHKILDMERAIIRDLVSHIL 2
           E+LQDFEFAFSDG+G+ KK+FYRT KTRELDNLLGDIYHKILDMERAI RDLVSHIL
Sbjct: 436 EKLQDFEFAFSDGDGDTKKFFYRTSKTRELDNLLGDIYHKILDMERAITRDLVSHIL 492


>ref|XP_004149586.1| PREDICTED: DNA mismatch repair protein MSH5-like [Cucumis sativus]
           gi|449519898|ref|XP_004166971.1| PREDICTED: DNA mismatch
           repair protein MSH5-like [Cucumis sativus]
          Length = 807

 Score =  192 bits (487), Expect = 3e-47
 Identities = 93/117 (79%), Positives = 107/117 (91%)
 Frame = -2

Query: 352 LDELRKIYEELPDLLEEVSSIEVARHPRLRADKLAPCIVYIHQTGYLLCIFEEQLDESTL 173
           LDELR++YEELP+ LEEVSS+E+A+ P+L    +APCIVYIHQ GYLLCIFEE+LDESTL
Sbjct: 376 LDELREVYEELPEFLEEVSSMELAQFPQLCKYTIAPCIVYIHQIGYLLCIFEEKLDESTL 435

Query: 172 EELQDFEFAFSDGEGEIKKYFYRTPKTRELDNLLGDIYHKILDMERAIIRDLVSHIL 2
           E LQDFEFAFSD +G+IK++FY +PKTRELDNLLGDIYHKILDMERAIIRDLVSHIL
Sbjct: 436 EILQDFEFAFSDVDGDIKRFFYHSPKTRELDNLLGDIYHKILDMERAIIRDLVSHIL 492


>ref|XP_002883246.1| hypothetical protein ARALYDRAFT_479572 [Arabidopsis lyrata subsp.
           lyrata] gi|297329086|gb|EFH59505.1| hypothetical protein
           ARALYDRAFT_479572 [Arabidopsis lyrata subsp. lyrata]
          Length = 807

 Score =  175 bits (444), Expect = 3e-42
 Identities = 83/117 (70%), Positives = 99/117 (84%)
 Frame = -2

Query: 352 LDELRKIYEELPDLLEEVSSIEVARHPRLRADKLAPCIVYIHQTGYLLCIFEEQLDESTL 173
           LDELR+IYEELP+ L+EVS++E+   P L  +KL PCIVYI Q GYL+CIF E+LDE+TL
Sbjct: 376 LDELRQIYEELPEFLQEVSAMELEHFPHLHKEKLPPCIVYIQQIGYLMCIFGEKLDETTL 435

Query: 172 EELQDFEFAFSDGEGEIKKYFYRTPKTRELDNLLGDIYHKILDMERAIIRDLVSHIL 2
             L +FEFAFSD +GE +++FY TPKTRELDNLLGDIYHKILDMERAIIRDL+SH L
Sbjct: 436 NRLTEFEFAFSDMDGETQRFFYHTPKTRELDNLLGDIYHKILDMERAIIRDLLSHTL 492


>ref|NP_188683.3| DNA mismatch repair protein MSH5 [Arabidopsis thaliana]
           gi|395406789|sp|F4JEP5.1|MSH5_ARATH RecName: Full=DNA
           mismatch repair protein MSH5; Short=AtMSH5; AltName:
           Full=MutS protein homolog 5 gi|332642863|gb|AEE76384.1|
           DNA mismatch repair protein MSH5 [Arabidopsis thaliana]
          Length = 807

 Score =  170 bits (431), Expect = 1e-40
 Identities = 81/117 (69%), Positives = 97/117 (82%)
 Frame = -2

Query: 352 LDELRKIYEELPDLLEEVSSIEVARHPRLRADKLAPCIVYIHQTGYLLCIFEEQLDESTL 173
           LDELR+IYEELP+ L+EVS++E+   P L  +KL PCIVYI Q GYL+CIF E+LDE+ L
Sbjct: 376 LDELRQIYEELPEFLQEVSAMELEHFPHLHKEKLPPCIVYIQQIGYLMCIFGEKLDETAL 435

Query: 172 EELQDFEFAFSDGEGEIKKYFYRTPKTRELDNLLGDIYHKILDMERAIIRDLVSHIL 2
             L +FEFAFSD +GE +++FY T KTRELDNLLGDIYHKILDMERAIIRDL+SH L
Sbjct: 436 NRLTEFEFAFSDMDGETQRFFYHTSKTRELDNLLGDIYHKILDMERAIIRDLLSHTL 492