BLASTX nr result

ID: Coptis23_contig00042285 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042285
         (446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539227.1| PREDICTED: uncharacterized protein LOC100785...    58   9e-07
ref|XP_003530071.1| PREDICTED: uncharacterized protein LOC100787...    57   1e-06

>ref|XP_003539227.1| PREDICTED: uncharacterized protein LOC100785086 [Glycine max]
          Length = 706

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 39/147 (26%), Positives = 64/147 (43%)
 Frame = -3

Query: 441 MQEPQEKLNVKGRPSISKKHVKVSTQDQNDTRREPSAFTYAQTQEEKKASEQVSKKRGRP 262
           M  P  K+N KG P           ++   T+R+PS + Y      ++ S  + +     
Sbjct: 405 MCPPPVKVNTKGAPM---------KRNPRSTKRDPSYWEYVDVFHSQQNSNSLVRHSSLS 455

Query: 261 CKNQGETQAIEKVLKKIGRPPKKPVQTSLLEDFNSLLSNFIVSCEDVLGDGHCGYRSIAR 82
                  + +                  +L+ F   + +FI S  DV  DG+CGYR +A 
Sbjct: 456 FDQSNPRRMMP-----------------MLDQFQPFIHDFIDSVVDVEADGNCGYRVVAG 498

Query: 81  LLNYGDETGWFTVRKRLLVELMEYAEE 1
           LL  G+++ W  VR  LL+EL ++AE+
Sbjct: 499 LLGMGEDS-WLLVRTHLLIELAKFAED 524


>ref|XP_003530071.1| PREDICTED: uncharacterized protein LOC100787990 [Glycine max]
          Length = 592

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 42/147 (28%), Positives = 63/147 (42%)
 Frame = -3

Query: 441 MQEPQEKLNVKGRPSISKKHVKVSTQDQNDTRREPSAFTYAQTQEEKKASEQVSKKRGRP 262
           M  P  K+  KG P       KV  + +  T+R+PS + Y         S Q S    RP
Sbjct: 379 MCPPPTKVKTKGAPK------KVMKRSERSTKRDPSYWEYVDAYH----SVQNSNTSVRP 428

Query: 261 CKNQGETQAIEKVLKKIGRPPKKPVQTSLLEDFNSLLSNFIVSCEDVLGDGHCGYRSIAR 82
             +                 PK      +L+ F   +  FI    DV  DG+CGYRS++ 
Sbjct: 429 SASSFAL-------------PKPARMIPMLDQFPPFMHGFIEDVVDVKADGNCGYRSVST 475

Query: 81  LLNYGDETGWFTVRKRLLVELMEYAEE 1
           LL  G+E  W  +R  L+ EL +++++
Sbjct: 476 LLGMGEEC-WAMMRNELIKELGKWSQD 501


Top