BLASTX nr result

ID: Coptis23_contig00042277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042277
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN60307.1| hypothetical protein VITISV_005069 [Vitis vinifera]    81   1e-13
emb|CBI30608.3| unnamed protein product [Vitis vinifera]               69   4e-10
ref|XP_002509432.1| conserved hypothetical protein [Ricinus comm...    65   4e-09
ref|XP_004156911.1| PREDICTED: uncharacterized protein LOC101232...    65   6e-09
ref|XP_004146617.1| PREDICTED: uncharacterized protein LOC101213...    65   6e-09

>emb|CAN60307.1| hypothetical protein VITISV_005069 [Vitis vinifera]
          Length = 433

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 40/86 (46%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
 Frame = +2

Query: 107 SHSVC-NSKSNNLTCEMHEMKLKISHLETILEQSIQSLDIKFHYLREKEKLIEGMTHKID 283
           S S C N +  N  CE+ EMKL+I+ LET++E+ +Q+ + K+ YL+++EKLIE  +HKI 
Sbjct: 30  SQSPCGNQQGVNSICELQEMKLRITQLETVMEEIVQNFNEKYLYLKQREKLIEEFSHKIH 89

Query: 284 FLHTVLANMKVGSKYTEERISALEEE 361
            L +VL ++K  S +  ER++ALEEE
Sbjct: 90  HLQSVLYSIKGDSSHANERLAALEEE 115


>emb|CBI30608.3| unnamed protein product [Vitis vinifera]
          Length = 247

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 32/67 (47%), Positives = 51/67 (76%)
 Frame = +2

Query: 161 MKLKISHLETILEQSIQSLDIKFHYLREKEKLIEGMTHKIDFLHTVLANMKVGSKYTEER 340
           MKL+I+ LET++E+ +Q+ + K+ YL+++EKLIE  +HKI  L +VL ++K  S +  ER
Sbjct: 1   MKLRITQLETVMEEIVQNFNEKYLYLKQREKLIEEFSHKIHHLQSVLYSIKGDSSHANER 60

Query: 341 ISALEEE 361
           ++ALEEE
Sbjct: 61  LAALEEE 67


>ref|XP_002509432.1| conserved hypothetical protein [Ricinus communis]
           gi|223549331|gb|EEF50819.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 529

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 31/80 (38%), Positives = 53/80 (66%)
 Frame = +2

Query: 122 NSKSNNLTCEMHEMKLKISHLETILEQSIQSLDIKFHYLREKEKLIEGMTHKIDFLHTVL 301
           +S +++L  ++HE KLK++  E+ LE+ +Q  + K  YL+++EK I+     +  LH  L
Sbjct: 28  HSTNHHLLTQLHEAKLKVAQFESSLEEIVQKAEAKELYLKKQEKQIQDSEKTLSDLHFTL 87

Query: 302 ANMKVGSKYTEERISALEEE 361
           +N+K GS  T+E++ ALEEE
Sbjct: 88  SNLKSGSLLTDEKVHALEEE 107


>ref|XP_004156911.1| PREDICTED: uncharacterized protein LOC101232017 [Cucumis sativus]
          Length = 291

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 34/79 (43%), Positives = 56/79 (70%)
 Frame = +2

Query: 125 SKSNNLTCEMHEMKLKISHLETILEQSIQSLDIKFHYLREKEKLIEGMTHKIDFLHTVLA 304
           S ++ L  E+  +KL+ISHLE++LE+S Q+L  K + L+ +EKLIE ++HKI +L + ++
Sbjct: 32  SGNDALIHELLGIKLRISHLESVLEESKQNLTEKSNELKAQEKLIEDVSHKIQYLESAIS 91

Query: 305 NMKVGSKYTEERISALEEE 361
           +MK      +ERI+ LE+E
Sbjct: 92  DMKRKISSDDERIAVLEDE 110


>ref|XP_004146617.1| PREDICTED: uncharacterized protein LOC101213056 [Cucumis sativus]
          Length = 291

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 34/79 (43%), Positives = 56/79 (70%)
 Frame = +2

Query: 125 SKSNNLTCEMHEMKLKISHLETILEQSIQSLDIKFHYLREKEKLIEGMTHKIDFLHTVLA 304
           S ++ L  E+  +KL+ISHLE++LE+S Q+L  K + L+ +EKLIE ++HKI +L + ++
Sbjct: 32  SGNDALIHELLGIKLRISHLESVLEESKQNLTEKSNELKAQEKLIEDVSHKIQYLESAIS 91

Query: 305 NMKVGSKYTEERISALEEE 361
           +MK      +ERI+ LE+E
Sbjct: 92  DMKRKISSDDERIAVLEDE 110


Top