BLASTX nr result

ID: Coptis23_contig00042273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042273
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO38219.1| RCa8 [Manihot esculenta]                               133   1e-29
gb|ABV30814.1| NBS-containing resistance-like protein [Platanus ...   122   2e-26
gb|AFU97133.1| NB-LRR resistance-like protein RC80, partial [Ger...   117   1e-24
gb|AFU97132.1| NB-LRR resistance-like protein RGC79, partial [Ge...   117   1e-24
gb|AFU97079.1| NB-LRR resistance-like protein RGC26, partial [Ge...   117   1e-24

>gb|AAO38219.1| RCa8 [Manihot esculenta]
          Length = 231

 Score =  133 bits (335), Expect = 1e-29
 Identities = 63/94 (67%), Positives = 75/94 (79%)
 Frame = -3

Query: 284 LFENLLRKKKFVLILDDLWRKFPLEKIGIPQPNMENGCKLVFTTRLMEVCRGMETQKEIT 105
           LF++LL +KKFVLILDDLW  F LE++GIPQP   NGCKLV  TRL+EVCRGMET +EI 
Sbjct: 63  LFDHLLARKKFVLILDDLWYGFSLEEVGIPQPTNANGCKLVVITRLLEVCRGMETHREIK 122

Query: 104 VEVLSKEEAWDLFVHKVGSDVMSSPEIERTARKI 3
           V+VLSKEEAWDLF+ K G D + SPE+E  A+ I
Sbjct: 123 VDVLSKEEAWDLFIDKAGRDAILSPEVETVAKLI 156


>gb|ABV30814.1| NBS-containing resistance-like protein [Platanus x acerifolia]
          Length = 157

 Score =  122 bits (307), Expect = 2e-26
 Identities = 55/95 (57%), Positives = 71/95 (74%)
 Frame = -3

Query: 287 RLFENLLRKKKFVLILDDLWRKFPLEKIGIPQPNMENGCKLVFTTRLMEVCRGMETQKEI 108
           +L   L R+K+F+LILDD+W  FPLE +GIP P  ENGCKL+ TTRL  VCRGMET++ +
Sbjct: 58  KLLVALERRKRFILILDDMWEAFPLENVGIPNPTRENGCKLLLTTRLKGVCRGMETERNV 117

Query: 107 TVEVLSKEEAWDLFVHKVGSDVMSSPEIERTARKI 3
            V VLSK+EAWDLF  KVG DV+ S +I+  A+ +
Sbjct: 118 EVRVLSKDEAWDLFKQKVGEDVLHSSDIQALAKDV 152


>gb|AFU97133.1| NB-LRR resistance-like protein RC80, partial [Gerbera hybrid
           cultivar] gi|408905175|gb|AFU97134.1| NB-LRR
           resistance-like protein RC81, partial [Gerbera hybrid
           cultivar]
          Length = 165

 Score =  117 bits (292), Expect = 1e-24
 Identities = 59/95 (62%), Positives = 73/95 (76%)
 Frame = -3

Query: 287 RLFENLLRKKKFVLILDDLWRKFPLEKIGIPQPNMENGCKLVFTTRLMEVCRGMETQKEI 108
           RL E+L + KKFVLILDD+W KF LE++GIPQP+  NGCK VF TRLMEVCRGMETQ+EI
Sbjct: 63  RLLEHL-QGKKFVLILDDMWHKFSLEEVGIPQPSTANGCKFVFVTRLMEVCRGMETQREI 121

Query: 107 TVEVLSKEEAWDLFVHKVGSDVMSSPEIERTARKI 3
            V++LSK+E+W LF  K GS  +   EIE  A+ +
Sbjct: 122 RVDLLSKKESWSLFTSKSGS--ILGDEIEPIAKAV 154


>gb|AFU97132.1| NB-LRR resistance-like protein RGC79, partial [Gerbera hybrid
           cultivar]
          Length = 166

 Score =  117 bits (292), Expect = 1e-24
 Identities = 59/95 (62%), Positives = 73/95 (76%)
 Frame = -3

Query: 287 RLFENLLRKKKFVLILDDLWRKFPLEKIGIPQPNMENGCKLVFTTRLMEVCRGMETQKEI 108
           RL E+L + KKFVLILDD+W KF LE++GIPQP+  NGCK VF TRLMEVCRGMETQ+EI
Sbjct: 63  RLLEHL-QGKKFVLILDDMWHKFSLEEVGIPQPSTANGCKFVFVTRLMEVCRGMETQREI 121

Query: 107 TVEVLSKEEAWDLFVHKVGSDVMSSPEIERTARKI 3
            V++LSK+E+W LF  K GS  +   EIE  A+ +
Sbjct: 122 RVDLLSKKESWSLFTSKSGS--ILGDEIEPIAKAV 154


>gb|AFU97079.1| NB-LRR resistance-like protein RGC26, partial [Gerbera hybrid
           cultivar]
          Length = 164

 Score =  117 bits (292), Expect = 1e-24
 Identities = 59/95 (62%), Positives = 73/95 (76%)
 Frame = -3

Query: 287 RLFENLLRKKKFVLILDDLWRKFPLEKIGIPQPNMENGCKLVFTTRLMEVCRGMETQKEI 108
           RL E+L + KKFVLILDD+W KF LE++GIPQP+  NGCK VF TRLMEVCRGMETQ+EI
Sbjct: 63  RLLEHL-QGKKFVLILDDMWHKFSLEEVGIPQPSTANGCKFVFVTRLMEVCRGMETQREI 121

Query: 107 TVEVLSKEEAWDLFVHKVGSDVMSSPEIERTARKI 3
            V++LSK+E+W LF  K GS  +   EIE  A+ +
Sbjct: 122 RVDLLSKKESWSLFTSKSGS--ILGDEIEPIAKAV 154


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