BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042270
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29839.3| unnamed protein product [Vitis vinifera]              116   2e-24
ref|XP_002284088.1| PREDICTED: exosome complex component RRP43-l...   116   2e-24
emb|CAN82224.1| hypothetical protein VITISV_011872 [Vitis vinifera]   113   1e-23
ref|XP_002532079.1| exosome complex exonuclease rrp43, putative ...   112   2e-23
ref|XP_004149399.1| PREDICTED: exosome complex component RRP43-l...   110   9e-23

>emb|CBI29839.3| unnamed protein product [Vitis vinifera]
          Length = 311

 Score =  116 bits (290), Expect = 2e-24
 Identities = 58/70 (82%), Positives = 65/70 (92%)
 Frame = +2

Query: 2   ADPTAEEESVMESLVTVVLDLSGQLVSFNKPGGPVLAYTSAVQDCIALTRQRVKELQKIL 181
           ADPTAEEES+ME+LVTVVLD SGQLVS  KPGGPVLAY SAVQDCIALTRQRVKEL+ IL
Sbjct: 242 ADPTAEEESIMETLVTVVLDSSGQLVSLYKPGGPVLAYASAVQDCIALTRQRVKELKSIL 301

Query: 182 NDAIADMKLD 211
           N+AI+DM++D
Sbjct: 302 NEAISDMEVD 311


>ref|XP_002284088.1| PREDICTED: exosome complex component RRP43-like [Vitis vinifera]
          Length = 303

 Score =  116 bits (290), Expect = 2e-24
 Identities = 58/70 (82%), Positives = 65/70 (92%)
 Frame = +2

Query: 2   ADPTAEEESVMESLVTVVLDLSGQLVSFNKPGGPVLAYTSAVQDCIALTRQRVKELQKIL 181
           ADPTAEEES+ME+LVTVVLD SGQLVS  KPGGPVLAY SAVQDCIALTRQRVKEL+ IL
Sbjct: 234 ADPTAEEESIMETLVTVVLDSSGQLVSLYKPGGPVLAYASAVQDCIALTRQRVKELKSIL 293

Query: 182 NDAIADMKLD 211
           N+AI+DM++D
Sbjct: 294 NEAISDMEVD 303


>emb|CAN82224.1| hypothetical protein VITISV_011872 [Vitis vinifera]
          Length = 1621

 Score =  113 bits (283), Expect = 1e-23
 Identities = 57/68 (83%), Positives = 63/68 (92%)
 Frame = +2

Query: 2   ADPTAEEESVMESLVTVVLDLSGQLVSFNKPGGPVLAYTSAVQDCIALTRQRVKELQKIL 181
           ADPTAEEES+ME+LVTVVLD SGQLVS  KPGGPVLAY SAVQDCIALTRQRVKEL+ IL
Sbjct: 235 ADPTAEEESIMETLVTVVLDSSGQLVSLYKPGGPVLAYASAVQDCIALTRQRVKELKSIL 294

Query: 182 NDAIADMK 205
           N+AI+DM+
Sbjct: 295 NEAISDME 302


>ref|XP_002532079.1| exosome complex exonuclease rrp43, putative [Ricinus communis]
           gi|223528261|gb|EEF30313.1| exosome complex exonuclease
           rrp43, putative [Ricinus communis]
          Length = 303

 Score =  112 bits (281), Expect = 2e-23
 Identities = 55/70 (78%), Positives = 65/70 (92%)
 Frame = +2

Query: 2   ADPTAEEESVMESLVTVVLDLSGQLVSFNKPGGPVLAYTSAVQDCIALTRQRVKELQKIL 181
           ADPTAEEES+ME+LVTVVLD S +LVSF KPGGPVLAYTSAVQDC+ALTRQRVKELQ IL
Sbjct: 234 ADPTAEEESIMETLVTVVLDSSARLVSFYKPGGPVLAYTSAVQDCVALTRQRVKELQNIL 293

Query: 182 NDAIADMKLD 211
           ++A++ M++D
Sbjct: 294 DEALSGMQID 303


>ref|XP_004149399.1| PREDICTED: exosome complex component RRP43-like [Cucumis sativus]
           gi|449503802|ref|XP_004162184.1| PREDICTED: exosome
           complex component RRP43-like [Cucumis sativus]
          Length = 304

 Score =  110 bits (276), Expect = 9e-23
 Identities = 57/70 (81%), Positives = 64/70 (91%)
 Frame = +2

Query: 2   ADPTAEEESVMESLVTVVLDLSGQLVSFNKPGGPVLAYTSAVQDCIALTRQRVKELQKIL 181
           ADPTAEEESVME++VTVVLD SGQLVSF KPGG VLAYTSAVQDCIALTRQR KELQ IL
Sbjct: 235 ADPTAEEESVMETIVTVVLDSSGQLVSFYKPGGSVLAYTSAVQDCIALTRQRSKELQIIL 294

Query: 182 NDAIADMKLD 211
           ++AI+ M++D
Sbjct: 295 DEAISGMEID 304