BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042257
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptas...    70   1e-10
dbj|BAM28750.1| reverse transcriptase-like protein, partial [Cam...    68   9e-10
dbj|BAM28751.1| reverse transcriptase-like protein, partial [Cam...    67   2e-09
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]              65   8e-09
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]              65   8e-09

>gb|ABD28627.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H
            [Medicago truncatula]
          Length = 1296

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 31/81 (38%), Positives = 45/81 (55%)
 Frame = -3

Query: 250  LHLINWSTICSKKSIGGLGVRSMRLHNIALLSKLCWQLTERSQNQWCTMVKHKYFPNEPF 71
            +HL+NW TI   KSIGGLG+RS R  NI LL KL W + + +   W  ++  KY      
Sbjct: 837  IHLVNWKTITRPKSIGGLGIRSARDANICLLGKLVWDMVQSTNKLWVNLLAKKYSSGTSL 896

Query: 70   LRAPLKQNAFRFWRNLVTVRD 8
            L A +  N+   W +++  +D
Sbjct: 897  LEANVNSNSSPSWFSIIRAKD 917


>dbj|BAM28750.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 31/85 (36%), Positives = 48/85 (56%)
 Frame = -3

Query: 265 EKSHNLHLINWSTICSKKSIGGLGVRSMRLHNIALLSKLCWQLTERSQNQWCTMVKHKYF 86
           E++  +H  +W  +C  K  GG+G R ++  N ALL+K CW+L +R Q+    + K +YF
Sbjct: 80  EETRKIHWTSWKQLCKSKLQGGMGFRCLQXFNSALLAKQCWRLVQRPQSLVARVFKARYF 139

Query: 85  PNEPFLRAPLKQNAFRFWRNLVTVR 11
           P   FL A +  N    WR++V  R
Sbjct: 140 PQTSFLDALVGSNPSFTWRSIVGSR 164


>dbj|BAM28751.1| reverse transcriptase-like protein, partial [Camellia sinensis var.
           sinensis]
          Length = 255

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 31/85 (36%), Positives = 48/85 (56%)
 Frame = -3

Query: 265 EKSHNLHLINWSTICSKKSIGGLGVRSMRLHNIALLSKLCWQLTERSQNQWCTMVKHKYF 86
           E++  +H  +W  +C  K  GG+G R ++  N ALL+K CW+L +R Q+    + K +YF
Sbjct: 80  EETRKIHWTSWKQLCKSKLRGGMGFRCLQHFNSALLAKQCWRLXQRPQSLVARVFKARYF 139

Query: 85  PNEPFLRAPLKQNAFRFWRNLVTVR 11
           P   FL A +  N    WR++V  R
Sbjct: 140 PQTSFLDALVGSNPSFTWRSIVGSR 164


>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
          Length = 1898

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 28/84 (33%), Positives = 45/84 (53%)
 Frame = -3

Query: 259  SHNLHLINWSTICSKKSIGGLGVRSMRLHNIALLSKLCWQLTERSQNQWCTMVKHKYFPN 80
            +  LH +NW+ IC  ++ GGLG+R  R  N A L+K+ WQ+       W  +++ KY  N
Sbjct: 1369 TRKLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKYVKN 1428

Query: 79   EPFLRAPLKQNAFRFWRNLVTVRD 8
              FL    + N    WR+++  +D
Sbjct: 1429 ADFLHLQSQSNCSWGWRSIMKGKD 1452


>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 28/84 (33%), Positives = 45/84 (53%)
 Frame = -3

Query: 259  SHNLHLINWSTICSKKSIGGLGVRSMRLHNIALLSKLCWQLTERSQNQWCTMVKHKYFPN 80
            +  LH +NW+ IC  ++ GGLG+R  R  N A L+K+ WQ+       W  +++ KY  N
Sbjct: 837  TRKLHSVNWAEICKPRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKYVKN 896

Query: 79   EPFLRAPLKQNAFRFWRNLVTVRD 8
              FL    + N    WR+++  +D
Sbjct: 897  ADFLHLQSQSNCSWGWRSIMKGKD 920