BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042238
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004144815.1| PREDICTED: pentatricopeptide repeat-containi...    56   3e-06
ref|XP_002278038.2| PREDICTED: uncharacterized protein LOC100244...    56   3e-06
emb|CBI39579.3| unnamed protein product [Vitis vinifera]               56   3e-06
emb|CBI21243.3| unnamed protein product [Vitis vinifera]               56   3e-06
ref|XP_002278152.1| PREDICTED: pentatricopeptide repeat-containi...    56   3e-06

>ref|XP_004144815.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09190-like [Cucumis sativus]
           gi|449490933|ref|XP_004158752.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g09190-like [Cucumis sativus]
          Length = 484

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 32/83 (38%), Positives = 44/83 (53%)
 Frame = +3

Query: 3   LKQIHAHIFKTHLHQNNSLASTLVSLYTSFSISTYTQRVFSSISNPTLSLYNHTIKAFSK 182
           L QIHAH  +  LHQ+N + +  +S+  SF+   Y  R+FS   NP + L+N  IKA S 
Sbjct: 25  LTQIHAHFLRHGLHQSNQILAHFISVCASFNRIAYADRLFSQSHNPNIFLFNSIIKAHSL 84

Query: 183 TPLFCIHCLTLYCKMTRVGIKPD 251
           +  F    L L+  M    I PD
Sbjct: 85  SVPF-HQSLLLFSSMKNHRIVPD 106


>ref|XP_002278038.2| PREDICTED: uncharacterized protein LOC100244618 [Vitis vinifera]
          Length = 1154

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 30/81 (37%), Positives = 50/81 (61%)
 Frame = +3

Query: 3   LKQIHAHIFKTHLHQNNSLASTLVSLYTSFSISTYTQRVFSSISNPTLSLYNHTIKAFSK 182
           LK +HA I K+HLH +  L ++L++ Y S    ++   +FS+  +  + L+NH I+AFS 
Sbjct: 483 LKSLHASILKSHLHPH--LCTSLIAQYASLGSISHAYALFSTSHSSNVFLWNHIIRAFSN 540

Query: 183 TPLFCIHCLTLYCKMTRVGIK 245
           TP    + L LY +M ++GI+
Sbjct: 541 TP-HSRNSLRLYSRMLQLGIQ 560


>emb|CBI39579.3| unnamed protein product [Vitis vinifera]
          Length = 459

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 33/86 (38%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
 Frame = +3

Query: 3   LKQIHAHIFKTHLHQNNSLASTLVSLYTSFSISTYTQRVFSSISNPTLSLYNHTIKAFSK 182
           L QIHAHI + HLHQ+N + S  +S+  +     Y   VF    NP L L+N  IK +S 
Sbjct: 25  LPQIHAHILRHHLHQSNQILSHFISVCGALDKMGYANLVFHQTQNPNLLLFNSMIKGYS- 83

Query: 183 TPLFC---IHCLTLYCKMTRVGIKPD 251
               C    + L L+ +M   GI PD
Sbjct: 84  ---LCGPSENSLLLFSQMKNRGIWPD 106


>emb|CBI21243.3| unnamed protein product [Vitis vinifera]
          Length = 778

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 30/81 (37%), Positives = 50/81 (61%)
 Frame = +3

Query: 3   LKQIHAHIFKTHLHQNNSLASTLVSLYTSFSISTYTQRVFSSISNPTLSLYNHTIKAFSK 182
           LK +HA I K+HLH +  L ++L++ Y S    ++   +FS+  +  + L+NH I+AFS 
Sbjct: 20  LKSLHASILKSHLHPH--LCTSLIAQYASLGSISHAYALFSTSHSSNVFLWNHIIRAFSN 77

Query: 183 TPLFCIHCLTLYCKMTRVGIK 245
           TP    + L LY +M ++GI+
Sbjct: 78  TP-HSRNSLRLYSRMLQLGIQ 97


>ref|XP_002278152.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09190
           [Vitis vinifera]
          Length = 485

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 33/86 (38%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
 Frame = +3

Query: 3   LKQIHAHIFKTHLHQNNSLASTLVSLYTSFSISTYTQRVFSSISNPTLSLYNHTIKAFSK 182
           L QIHAHI + HLHQ+N + S  +S+  +     Y   VF    NP L L+N  IK +S 
Sbjct: 25  LPQIHAHILRHHLHQSNQILSHFISVCGALDKMGYANLVFHQTQNPNLLLFNSMIKGYS- 83

Query: 183 TPLFC---IHCLTLYCKMTRVGIKPD 251
               C    + L L+ +M   GI PD
Sbjct: 84  ---LCGPSENSLLLFSQMKNRGIWPD 106