BLASTX nr result

ID: Coptis23_contig00042220 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042220
         (435 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_200685.1| dehydrodolichyl diphosphate synthase 2 [Arabido...   104   8e-21
ref|XP_002864588.1| hypothetical protein ARALYDRAFT_496002 [Arab...   104   8e-21
ref|XP_002279235.2| PREDICTED: dehydrodolichyl diphosphate synth...   103   1e-20
emb|CBI15960.3| unnamed protein product [Vitis vinifera]              103   1e-20
emb|CAN61894.1| hypothetical protein VITISV_028791 [Vitis vinifera]   103   1e-20

>ref|NP_200685.1| dehydrodolichyl diphosphate synthase 2 [Arabidopsis thaliana]
           gi|85541788|sp|Q56Y11.2|DDPS2_ARATH RecName:
           Full=Dehydrodolichyl diphosphate synthase 2;
           Short=Dedol-PP synthase 2 gi|8843797|dbj|BAA97345.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|208879536|gb|ACI31313.1| At5g58770 [Arabidopsis
           thaliana] gi|332009713|gb|AED97096.1| dehydrodolichyl
           diphosphate synthase 2 [Arabidopsis thaliana]
          Length = 310

 Score =  104 bits (259), Expect = 8e-21
 Identities = 48/56 (85%), Positives = 50/56 (89%)
 Frame = -2

Query: 434 ELETNCTKFPYPDLFIRTSGELRVSNFLLWQLAYTELCFVQSLWPDFGEAEFIEAL 267
           ELETNCT+FPYPDL IRTSGELRVSNFLLWQLAYTEL F Q LWPDFG + FIEAL
Sbjct: 240 ELETNCTEFPYPDLLIRTSGELRVSNFLLWQLAYTELFFAQELWPDFGRSGFIEAL 295


>ref|XP_002864588.1| hypothetical protein ARALYDRAFT_496002 [Arabidopsis lyrata subsp.
           lyrata] gi|297310423|gb|EFH40847.1| hypothetical protein
           ARALYDRAFT_496002 [Arabidopsis lyrata subsp. lyrata]
          Length = 310

 Score =  104 bits (259), Expect = 8e-21
 Identities = 48/56 (85%), Positives = 50/56 (89%)
 Frame = -2

Query: 434 ELETNCTKFPYPDLFIRTSGELRVSNFLLWQLAYTELCFVQSLWPDFGEAEFIEAL 267
           ELETNCT+FPYPDL IRTSGELRVSNFLLWQLAYTEL F Q LWPDFG + FIEAL
Sbjct: 240 ELETNCTEFPYPDLLIRTSGELRVSNFLLWQLAYTELFFAQELWPDFGRSGFIEAL 295


>ref|XP_002279235.2| PREDICTED: dehydrodolichyl diphosphate synthase 2-like [Vitis
           vinifera]
          Length = 311

 Score =  103 bits (258), Expect = 1e-20
 Identities = 44/56 (78%), Positives = 52/56 (92%)
 Frame = -2

Query: 434 ELETNCTKFPYPDLFIRTSGELRVSNFLLWQLAYTELCFVQSLWPDFGEAEFIEAL 267
           EL+TNCT+FP+PDL IRTSGELRVSNF+LWQ+AYTELCF  +LWPDFG+ EF+EAL
Sbjct: 242 ELQTNCTEFPFPDLLIRTSGELRVSNFMLWQIAYTELCFFSTLWPDFGKDEFVEAL 297


>emb|CBI15960.3| unnamed protein product [Vitis vinifera]
          Length = 233

 Score =  103 bits (258), Expect = 1e-20
 Identities = 44/56 (78%), Positives = 52/56 (92%)
 Frame = -2

Query: 434 ELETNCTKFPYPDLFIRTSGELRVSNFLLWQLAYTELCFVQSLWPDFGEAEFIEAL 267
           EL+TNCT+FP+PDL IRTSGELRVSNF+LWQ+AYTELCF  +LWPDFG+ EF+EAL
Sbjct: 164 ELQTNCTEFPFPDLLIRTSGELRVSNFMLWQIAYTELCFFSTLWPDFGKDEFVEAL 219


>emb|CAN61894.1| hypothetical protein VITISV_028791 [Vitis vinifera]
          Length = 592

 Score =  103 bits (258), Expect = 1e-20
 Identities = 44/56 (78%), Positives = 52/56 (92%)
 Frame = -2

Query: 434 ELETNCTKFPYPDLFIRTSGELRVSNFLLWQLAYTELCFVQSLWPDFGEAEFIEAL 267
           EL+TNCT+FP+PDL IRTSGELRVSNF+LWQ+AYTELCF  +LWPDFG+ EF+EAL
Sbjct: 248 ELQTNCTEFPFPDLLIRTSGELRVSNFMLWQIAYTELCFFSTLWPDFGKDEFVEAL 303


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