BLASTX nr result

ID: Coptis23_contig00042212 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042212
         (298 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313782.1| predicted protein [Populus trichocarpa] gi|2...    96   4e-18
ref|XP_002512942.1| Sec14 cytosolic factor, putative [Ricinus co...    94   1e-17
ref|XP_002305440.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
ref|XP_002280238.2| PREDICTED: uncharacterized protein LOC100245...    87   2e-15
emb|CAN82580.1| hypothetical protein VITISV_008779 [Vitis vinifera]    87   2e-15

>ref|XP_002313782.1| predicted protein [Populus trichocarpa] gi|222850190|gb|EEE87737.1|
           predicted protein [Populus trichocarpa]
          Length = 535

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 46/58 (79%), Positives = 54/58 (93%)
 Frame = +3

Query: 123 ADVENSEDERRTKIGSFKKKAINASTKFRNSLTKKGRRHSRVMSVTIEDEHDAEELQA 296
           +D E+SEDER+TK+GS KKKAI+AS KFRNSLTKKGRRHSRVMS++IED+ DAEELQA
Sbjct: 4   SDTEHSEDERKTKLGSLKKKAISASNKFRNSLTKKGRRHSRVMSISIEDDLDAEELQA 61


>ref|XP_002512942.1| Sec14 cytosolic factor, putative [Ricinus communis]
           gi|223547953|gb|EEF49445.1| Sec14 cytosolic factor,
           putative [Ricinus communis]
          Length = 555

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 48/69 (69%), Positives = 57/69 (82%), Gaps = 2/69 (2%)
 Frame = +3

Query: 96  LDRASRPGP--ADVENSEDERRTKIGSFKKKAINASTKFRNSLTKKGRRHSRVMSVTIED 269
           LDR  + GP  +D +N EDER+T++ + KKKAINAS KFRNSLTKKGRRHSRVMSV IED
Sbjct: 11  LDRHIKAGPEKSDTDNVEDERKTRLAALKKKAINASNKFRNSLTKKGRRHSRVMSVAIED 70

Query: 270 EHDAEELQA 296
           + +AEELQA
Sbjct: 71  DINAEELQA 79


>ref|XP_002305440.1| predicted protein [Populus trichocarpa] gi|222848404|gb|EEE85951.1|
           predicted protein [Populus trichocarpa]
          Length = 597

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 48/74 (64%), Positives = 58/74 (78%), Gaps = 2/74 (2%)
 Frame = +3

Query: 81  TIMTDLDRASRPG--PADVENSEDERRTKIGSFKKKAINASTKFRNSLTKKGRRHSRVMS 254
           T+   LDR  + G   +D E SED+R+TK+GS KKKAI+AS KFRNSLTK+GRRHSRVMS
Sbjct: 41  TMSGPLDRDIKGGLEKSDAEYSEDDRKTKLGSLKKKAISASNKFRNSLTKRGRRHSRVMS 100

Query: 255 VTIEDEHDAEELQA 296
           + IED  +AEELQA
Sbjct: 101 IAIEDNLNAEELQA 114


>ref|XP_002280238.2| PREDICTED: uncharacterized protein LOC100245225, partial [Vitis
           vinifera]
          Length = 619

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 42/59 (71%), Positives = 54/59 (91%), Gaps = 1/59 (1%)
 Frame = +3

Query: 123 ADVENSEDERRTKIGSFKKKAINASTKFRNSLTKKGRRHSRVMSVTI-EDEHDAEELQA 296
           +D+ENSEDER+ K+G+FKKKAI AS+KFRNSLTKKGRR+S+VM++ + ED+ DAEELQA
Sbjct: 6   SDIENSEDERKKKMGTFKKKAITASSKFRNSLTKKGRRNSKVMNIAVEEDDLDAEELQA 64


>emb|CAN82580.1| hypothetical protein VITISV_008779 [Vitis vinifera]
          Length = 637

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 42/59 (71%), Positives = 54/59 (91%), Gaps = 1/59 (1%)
 Frame = +3

Query: 123 ADVENSEDERRTKIGSFKKKAINASTKFRNSLTKKGRRHSRVMSVTI-EDEHDAEELQA 296
           +D+ENSEDER+ K+G+FKKKAI AS+KFRNSLTKKGRR+S+VM++ + ED+ DAEELQA
Sbjct: 28  SDIENSEDERKKKMGTFKKKAITASSKFRNSLTKKGRRNSKVMNIAVEEDDLDAEELQA 86


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