BLASTX nr result

ID: Coptis23_contig00042183 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042183
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAY84145.1| late embryogenesis abundant protein [Catharanthus...   109   2e-22
sp|O49816.1|LEA1_CICAR RecName: Full=Late embryogenesis abundant...   102   3e-20
emb|CAA63006.1| LEA76 homologue type2 [Arabidopsis thaliana]           98   8e-19
emb|CAD59383.1| group 3 late embryogenesis abundant protein [Bra...    98   8e-19
ref|NP_188188.1| late embryogenesis abundant domain-containing p...    97   1e-18

>gb|AAY84145.1| late embryogenesis abundant protein [Catharanthus roseus]
          Length = 163

 Score =  109 bits (273), Expect = 2e-22
 Identities = 60/121 (49%), Positives = 77/121 (63%), Gaps = 22/121 (18%)
 Frame = +1

Query: 64  MASQDQNYKASETKGQAQEKAGQMLGGVRDKAEEAKSKANETAQT--------------- 198
           MAS +Q+YKA E KGQAQEK GQM+G V++K ++AK KA+ETAQ+               
Sbjct: 1   MASHEQSYKAGEAKGQAQEKTGQMMGDVKEKTQQAKDKASETAQSAQGRAQEKKDQTGSY 60

Query: 199 -------AKDKVSGTTQAAKDKTSDGTRAAGDRARESAQSARDTAEAGKEKTGGIVQGTV 357
                  AKDK+S TTQ+AK++ S    A   +A E AQS ++TAEAGKEKTGG +Q T 
Sbjct: 61  VSDKAGAAKDKLSETTQSAKERASGAAEATKQKASEMAQSGKETAEAGKEKTGGFLQKTG 120

Query: 358 E 360
           E
Sbjct: 121 E 121


>sp|O49816.1|LEA1_CICAR RecName: Full=Late embryogenesis abundant protein 1; AltName:
           Full=CapLEA-1 gi|2909420|emb|CAA12026.1| LEA protein
           [Cicer arietinum]
          Length = 177

 Score =  102 bits (254), Expect = 3e-20
 Identities = 52/103 (50%), Positives = 71/103 (68%), Gaps = 4/103 (3%)
 Frame = +1

Query: 64  MASQDQNYKASETKGQAQEKAGQMLGGVRDKAEEAKSKANETAQTAKDKVSGTTQAAKDK 243
           MAS DQ+YKA ET G+ +EK  QM+G + DKA+ AK KA + AQTAKDK S T QAAK+K
Sbjct: 1   MASHDQSYKAGETMGRTEEKTNQMIGNIEDKAQAAKEKAQQAAQTAKDKTSQTAQAAKEK 60

Query: 244 TSDGTRAAGDRARESAQSARD----TAEAGKEKTGGIVQGTVE 360
           T    +AA ++ +++AQ+A+D    TA+A K+KT    + T E
Sbjct: 61  TQQTAQAAKEKTQQTAQAAKDETQQTAQAAKDKTQQTTEATKE 103


>emb|CAA63006.1| LEA76 homologue type2 [Arabidopsis thaliana]
          Length = 225

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 51/103 (49%), Positives = 70/103 (67%), Gaps = 4/103 (3%)
 Frame = +1

Query: 64  MASQDQNYKASETKGQAQEKAGQMLGGVRDKAEEAKSKANETAQTAKDKVSGTTQAAKDK 243
           MAS  Q+YKA ET+G+AQEK GQ +G +RDKAEE + K ++TAQTA+ K   T Q+AKDK
Sbjct: 1   MASNQQSYKAGETRGKAQEKTGQAMGTMRDKAEEGRDKTSQTAQTAQQKAHETAQSAKDK 60

Query: 244 TSDGTRAAGDRARESAQSARD----TAEAGKEKTGGIVQGTVE 360
           TS   +AA  +A E+AQSA++    TA+  ++K    +Q   E
Sbjct: 61  TSQTAQAAQQKAHETAQSAKEKTSQTAQTAQQKAHKTMQAAKE 103


>emb|CAD59383.1| group 3 late embryogenesis abundant protein [Brassica napus]
           gi|56605423|emb|CAD59386.1| group 3 late embryogenesis
           abundant protein [Brassica napus]
          Length = 160

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 52/114 (45%), Positives = 70/114 (61%), Gaps = 15/114 (13%)
 Frame = +1

Query: 64  MASQDQNYKASETKGQAQEKAGQMLGGVRDKAEEAKSKANETAQTAKDKVSGTTQAAKDK 243
           MAS  Q+YKA ET+G+ QEK GQ +G +RDKAEE K+K ++TAQTA+ K   TTQAAKDK
Sbjct: 1   MASNQQSYKAGETRGKTQEKTGQTMGAMRDKAEEGKNKTSQTAQTAQQKAHETTQAAKDK 60

Query: 244 TSDGTRAAGDRARESAQSARD---------------TAEAGKEKTGGIVQGTVE 360
           TS   +    +++E+AQ+A+D               T ++ KEKT    Q   E
Sbjct: 61  TSQAAQTTQQKSQETAQAAKDKTSQAAQTTQQKAHETTQSAKEKTSQTAQTAQE 114


>ref|NP_188188.1| late embryogenesis abundant domain-containing protein [Arabidopsis
           thaliana] gi|11994339|dbj|BAB02298.1| embryonic abundant
           protein LEA-like [Arabidopsis thaliana]
           gi|14532804|gb|AAK64183.1| putative LEA76 homologue
           type2 [Arabidopsis thaliana] gi|15809790|gb|AAL06823.1|
           AT3g15670/MSJ11_7 [Arabidopsis thaliana]
           gi|19310821|gb|AAL85141.1| putative LEA76 homologue
           type2 [Arabidopsis thaliana] gi|332642191|gb|AEE75712.1|
           late embryogenesis abundant domain-containing protein
           [Arabidopsis thaliana]
          Length = 225

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 51/103 (49%), Positives = 69/103 (66%), Gaps = 4/103 (3%)
 Frame = +1

Query: 64  MASQDQNYKASETKGQAQEKAGQMLGGVRDKAEEAKSKANETAQTAKDKVSGTTQAAKDK 243
           MAS  Q+YKA ET+G+AQEK GQ +G +RDKAEE + K ++TAQTA+ K   T Q+AKDK
Sbjct: 1   MASNQQSYKAGETRGKAQEKTGQAMGTMRDKAEEGRDKTSQTAQTAQQKAHETAQSAKDK 60

Query: 244 TSDGTRAAGDRARESAQSARD----TAEAGKEKTGGIVQGTVE 360
           TS   +AA  +A E+AQSA++    TA+  ++K     Q   E
Sbjct: 61  TSQTAQAAQQKAHETAQSAKEKTSQTAQTAQQKAHETTQAAKE 103


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