BLASTX nr result

ID: Coptis23_contig00042171 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042171
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283343.1| PREDICTED: uncharacterized protein LOC100267...   140   8e-32
emb|CAN72847.1| hypothetical protein VITISV_013937 [Vitis vinifera]   140   8e-32
ref|XP_002510086.1| protein binding protein, putative [Ricinus c...   132   2e-29
ref|XP_002320026.1| predicted protein [Populus trichocarpa] gi|2...   130   8e-29
ref|XP_003589054.1| Exocyst complex component [Medicago truncatu...   124   6e-27

>ref|XP_002283343.1| PREDICTED: uncharacterized protein LOC100267832 [Vitis vinifera]
           gi|302142191|emb|CBI19394.3| unnamed protein product
           [Vitis vinifera]
          Length = 695

 Score =  140 bits (354), Expect = 8e-32
 Identities = 73/101 (72%), Positives = 88/101 (87%)
 Frame = -1

Query: 305 FLSRTKATDHYRTRRLKETLVTLKALYETEVDAMRYEGLLDEALLSLQDEYESILQQLKH 126
           FLSRT+ATD YRT RL+ETL+TLKALYETEVDAMR++GLLDEALL+LQDEYE ILQQL+H
Sbjct: 150 FLSRTRATDQYRTHRLRETLITLKALYETEVDAMRFDGLLDEALLNLQDEYERILQQLRH 209

Query: 125 KNIGDQLQADEGTEVEEISDLGSELEIDVLKRIAETLARND 3
           +NI  +LQ D   E+   SDLG+ELE++VL+RI+ETLA ND
Sbjct: 210 RNIA-ELQGDAPAEM-MASDLGTELEVEVLRRISETLAAND 248


>emb|CAN72847.1| hypothetical protein VITISV_013937 [Vitis vinifera]
          Length = 705

 Score =  140 bits (354), Expect = 8e-32
 Identities = 73/101 (72%), Positives = 88/101 (87%)
 Frame = -1

Query: 305 FLSRTKATDHYRTRRLKETLVTLKALYETEVDAMRYEGLLDEALLSLQDEYESILQQLKH 126
           FLSRT+ATD YRT RL+ETL+TLKALYETEVDAMR++GLLDEALL+LQDEYE ILQQL+H
Sbjct: 150 FLSRTRATDQYRTHRLRETLITLKALYETEVDAMRFDGLLDEALLNLQDEYERILQQLRH 209

Query: 125 KNIGDQLQADEGTEVEEISDLGSELEIDVLKRIAETLARND 3
           +NI  +LQ D   E+   SDLG+ELE++VL+RI+ETLA ND
Sbjct: 210 RNIA-ELQGDXPAEM-MASDLGTELEVEVLRRISETLAXND 248


>ref|XP_002510086.1| protein binding protein, putative [Ricinus communis]
           gi|223550787|gb|EEF52273.1| protein binding protein,
           putative [Ricinus communis]
          Length = 714

 Score =  132 bits (333), Expect = 2e-29
 Identities = 69/103 (66%), Positives = 84/103 (81%), Gaps = 2/103 (1%)
 Frame = -1

Query: 305 FLSRTKATDHYRTRRLKETLVTLKALYETEVDAMRYEGLLDEALLSLQDEYESILQQLKH 126
           FLSRTKATD YR RRL+ETLVTLK+LYETEVDAM+++GLLDEALL LQD+YE ILQQL H
Sbjct: 149 FLSRTKATDQYRARRLRETLVTLKSLYETEVDAMKFDGLLDEALLILQDQYEGILQQLNH 208

Query: 125 KNIGDQLQADEGTE--VEEISDLGSELEIDVLKRIAETLARND 3
           +NIG+ +  DE  +    + S LGS +EI +L+RI+ETLA ND
Sbjct: 209 RNIGESVGDDEDDDDGKADNSHLGSGMEIVILRRISETLASND 251


>ref|XP_002320026.1| predicted protein [Populus trichocarpa] gi|222860799|gb|EEE98341.1|
           predicted protein [Populus trichocarpa]
          Length = 703

 Score =  130 bits (328), Expect = 8e-29
 Identities = 69/101 (68%), Positives = 85/101 (84%)
 Frame = -1

Query: 305 FLSRTKATDHYRTRRLKETLVTLKALYETEVDAMRYEGLLDEALLSLQDEYESILQQLKH 126
           FLSRTKATD YR  RL+ETLVTLK LYETE+DAM+++GLLDEALL LQDE+ESILQ+LKH
Sbjct: 150 FLSRTKATDQYRAYRLRETLVTLKILYETEIDAMKFDGLLDEALLHLQDEHESILQKLKH 209

Query: 125 KNIGDQLQADEGTEVEEISDLGSELEIDVLKRIAETLARND 3
            NI D+ Q     ++ + SDLG+EL+I+VL+RI+ETLA ND
Sbjct: 210 HNI-DESQGGNKLDMAD-SDLGTELDIEVLRRISETLAAND 248


>ref|XP_003589054.1| Exocyst complex component [Medicago truncatula]
           gi|355478102|gb|AES59305.1| Exocyst complex component
           [Medicago truncatula]
          Length = 706

 Score =  124 bits (312), Expect = 6e-27
 Identities = 64/106 (60%), Positives = 80/106 (75%), Gaps = 5/106 (4%)
 Frame = -1

Query: 305 FLSRTKATDHYRTRRLKETLVTLKALYETEVDAMRYEGLLDEALLSLQDEYESILQQLKH 126
           F+SRTKA D YRT+RL+E L+TLKALYETEVD MR+EGLLD+ALL +QDE+E +L +LKH
Sbjct: 157 FISRTKAADQYRTQRLREALITLKALYETEVDEMRFEGLLDQALLHMQDEFEVLLLKLKH 216

Query: 125 KNIGDQLQADEGTE-----VEEISDLGSELEIDVLKRIAETLARND 3
           + +GD      G E      E   +LGSELEI+VL+RI+ TLA ND
Sbjct: 217 RKLGDMSHMQNGGEDCDDHFEVSFELGSELEIEVLRRISNTLAAND 262


Top