BLASTX nr result

ID: Coptis23_contig00042158 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042158
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326795.1| condensin complex components subunit [Populu...   148   4e-34
ref|XP_004165033.1| PREDICTED: structural maintenance of chromos...   144   1e-32
ref|XP_004148146.1| PREDICTED: structural maintenance of chromos...   144   1e-32
emb|CAN68529.1| hypothetical protein VITISV_032933 [Vitis vinifera]   144   1e-32
emb|CBI24628.3| unnamed protein product [Vitis vinifera]              142   2e-32

>ref|XP_002326795.1| condensin complex components subunit [Populus trichocarpa]
           gi|222834117|gb|EEE72594.1| condensin complex components
           subunit [Populus trichocarpa]
          Length = 1176

 Score =  148 bits (374), Expect = 4e-34
 Identities = 71/98 (72%), Positives = 88/98 (89%)
 Frame = -3

Query: 295 NQEDSLKTEQKNAEKAAKNIKDIETSIEERNAAVKKSEDGAADLKKRVDDLSKSLEEYEK 116
           N+ED+L++EQ+NAEK   +I+D++ S+EER  AVKKSE+GAADLKKRV+D  KSLE YEK
Sbjct: 319 NKEDTLRSEQENAEKIVHSIEDLKQSVEERATAVKKSEEGAADLKKRVEDFFKSLENYEK 378

Query: 115 QYQGILAGKSSGDDEKCLEDQLGDAKAAVGSAETELKQ 2
           +YQG+LAGKSSGD+EKCLEDQLG+AK AVG+AETELKQ
Sbjct: 379 EYQGVLAGKSSGDEEKCLEDQLGEAKVAVGNAETELKQ 416


>ref|XP_004165033.1| PREDICTED: structural maintenance of chromosomes protein 2-1-like
           [Cucumis sativus]
          Length = 1176

 Score =  144 bits (362), Expect = 1e-32
 Identities = 69/98 (70%), Positives = 85/98 (86%)
 Frame = -3

Query: 295 NQEDSLKTEQKNAEKAAKNIKDIETSIEERNAAVKKSEDGAADLKKRVDDLSKSLEEYEK 116
           N+ED+LK E+KNAEK   +IKD+  S+EER +AVKK+E+GAADL+K V+ LSK +E+YEK
Sbjct: 319 NKEDNLKGEKKNAEKMVNDIKDLMNSVEERASAVKKAEEGAADLRKSVEKLSKDVEDYEK 378

Query: 115 QYQGILAGKSSGDDEKCLEDQLGDAKAAVGSAETELKQ 2
           +YQG+LAGK SGD+EKCLEDQLGDAK AVG AETELKQ
Sbjct: 379 EYQGVLAGKGSGDEEKCLEDQLGDAKVAVGCAETELKQ 416


>ref|XP_004148146.1| PREDICTED: structural maintenance of chromosomes protein 2-1-like
           [Cucumis sativus]
          Length = 1176

 Score =  144 bits (362), Expect = 1e-32
 Identities = 69/98 (70%), Positives = 85/98 (86%)
 Frame = -3

Query: 295 NQEDSLKTEQKNAEKAAKNIKDIETSIEERNAAVKKSEDGAADLKKRVDDLSKSLEEYEK 116
           N+ED+LK E+KNAEK   +IKD+  S+EER +AVKK+E+GAADL+K V+ LSK +E+YEK
Sbjct: 319 NKEDNLKGEKKNAEKMVNDIKDLMNSVEERASAVKKAEEGAADLRKSVEKLSKDVEDYEK 378

Query: 115 QYQGILAGKSSGDDEKCLEDQLGDAKAAVGSAETELKQ 2
           +YQG+LAGK SGD+EKCLEDQLGDAK AVG AETELKQ
Sbjct: 379 EYQGVLAGKGSGDEEKCLEDQLGDAKVAVGCAETELKQ 416


>emb|CAN68529.1| hypothetical protein VITISV_032933 [Vitis vinifera]
          Length = 1137

 Score =  144 bits (362), Expect = 1e-32
 Identities = 69/98 (70%), Positives = 88/98 (89%)
 Frame = -3

Query: 295 NQEDSLKTEQKNAEKAAKNIKDIETSIEERNAAVKKSEDGAADLKKRVDDLSKSLEEYEK 116
           NQED+LK+E++NA K  + I+D++ S+EER +AVK++EDGAADLK+RV++LSK+LEE EK
Sbjct: 319 NQEDTLKSEKENAXKIVRGIEDLKQSVEERASAVKRAEDGAADLKQRVEELSKNLEECEK 378

Query: 115 QYQGILAGKSSGDDEKCLEDQLGDAKAAVGSAETELKQ 2
           +YQG+LAGKSSG +EKCLEDQL DAK AVGSAETELKQ
Sbjct: 379 EYQGVLAGKSSGSEEKCLEDQLADAKVAVGSAETELKQ 416


>emb|CBI24628.3| unnamed protein product [Vitis vinifera]
          Length = 1171

 Score =  142 bits (359), Expect = 2e-32
 Identities = 68/98 (69%), Positives = 88/98 (89%)
 Frame = -3

Query: 295 NQEDSLKTEQKNAEKAAKNIKDIETSIEERNAAVKKSEDGAADLKKRVDDLSKSLEEYEK 116
           NQED+LK+E++NA K  + I+D++ S+EER +AVK++EDGAADLK+RV++LSK+LEE E+
Sbjct: 274 NQEDTLKSEKENAAKIVRGIEDLKQSVEERASAVKRAEDGAADLKQRVEELSKNLEECER 333

Query: 115 QYQGILAGKSSGDDEKCLEDQLGDAKAAVGSAETELKQ 2
           +YQG+LAGKSSG +EKCLEDQL DAK AVGSAETELKQ
Sbjct: 334 EYQGVLAGKSSGSEEKCLEDQLADAKVAVGSAETELKQ 371


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