BLASTX nr result

ID: Coptis23_contig00042141 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042141
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311027.1| predicted protein [Populus trichocarpa] gi|2...   127   9e-28
ref|XP_002311025.1| predicted protein [Populus trichocarpa] gi|2...   122   2e-26
emb|CBI35215.3| unnamed protein product [Vitis vinifera]              122   4e-26
ref|XP_002263931.1| PREDICTED: uncharacterized protein LOC100245...   122   4e-26
ref|XP_002328475.1| predicted protein [Populus trichocarpa] gi|2...   119   2e-25

>ref|XP_002311027.1| predicted protein [Populus trichocarpa] gi|222850847|gb|EEE88394.1|
           predicted protein [Populus trichocarpa]
          Length = 396

 Score =  127 bits (319), Expect = 9e-28
 Identities = 66/118 (55%), Positives = 87/118 (73%)
 Frame = +3

Query: 3   KLFIFFMVSDALSLFSSCTSLLMFLGILTSRYAEQDFLLSLPRKLILGLTTLFFSIVFMM 182
           K F+ F++SDA+SLF+S TS+LMFLGILTSRY+E DFL+S PRKL++GL+TLF S+  MM
Sbjct: 276 KSFLIFIISDAISLFASSTSVLMFLGILTSRYSENDFLISFPRKLVIGLSTLFISVAAMM 335

Query: 183 AAFCATLFIILHDGSLWVPILSTSLAISGPVVLFLMLQIRLLKDMIFSYYAPSIFRKK 356
            AFCA L I++ DG L V ++  SL    PV LF++LQ  LL ++  S Y P IF +K
Sbjct: 336 VAFCAALRIVM-DGRLEV-VIPVSLLAGIPVTLFILLQFPLLVEIFMSTYGPGIFNRK 391


>ref|XP_002311025.1| predicted protein [Populus trichocarpa] gi|222850845|gb|EEE88392.1|
           predicted protein [Populus trichocarpa]
          Length = 376

 Score =  122 bits (307), Expect = 2e-26
 Identities = 70/118 (59%), Positives = 85/118 (72%)
 Frame = +3

Query: 3   KLFIFFMVSDALSLFSSCTSLLMFLGILTSRYAEQDFLLSLPRKLILGLTTLFFSIVFMM 182
           K F  F+V+DA+SLFSS TS+LMFLGILTSRYAE+DFL SLP KLI+GL+ LFFSI  MM
Sbjct: 238 KSFTVFIVADAISLFSSSTSVLMFLGILTSRYAEEDFLKSLPTKLIIGLSMLFFSIAAMM 297

Query: 183 AAFCATLFIILHDGSLWVPILSTSLAISGPVVLFLMLQIRLLKDMIFSYYAPSIFRKK 356
             FCA L I+L DG L V I+   L  + PV LF++LQ  LL ++  S Y P IF +K
Sbjct: 298 VTFCAALIIML-DGRLQV-IIPIVLLATIPVTLFMLLQFPLLVEIGVSTYGPGIFNRK 353


>emb|CBI35215.3| unnamed protein product [Vitis vinifera]
          Length = 655

 Score =  122 bits (305), Expect = 4e-26
 Identities = 65/117 (55%), Positives = 82/117 (70%)
 Frame = +3

Query: 6   LFIFFMVSDALSLFSSCTSLLMFLGILTSRYAEQDFLLSLPRKLILGLTTLFFSIVFMMA 185
           LF+ F++SD++SLFS+ TS+LMFLGILTS+YAE  FL  LP KLI+GL+TLFFSI  MM 
Sbjct: 534 LFMVFIISDSISLFSATTSVLMFLGILTSQYAENKFLTRLPTKLIIGLSTLFFSIATMMI 593

Query: 186 AFCATLFIILHDGSLWVPILSTSLAISGPVVLFLMLQIRLLKDMIFSYYAPSIFRKK 356
           AFCA L I+L   S  V I+   L    PV LF++LQ  LL ++  S Y P IF +K
Sbjct: 594 AFCAALAILLKGRSTKVVIIPIILLACVPVTLFVLLQFPLLVEIFISTYGPGIFNRK 650


>ref|XP_002263931.1| PREDICTED: uncharacterized protein LOC100245348 [Vitis vinifera]
          Length = 810

 Score =  122 bits (305), Expect = 4e-26
 Identities = 65/117 (55%), Positives = 82/117 (70%)
 Frame = +3

Query: 6    LFIFFMVSDALSLFSSCTSLLMFLGILTSRYAEQDFLLSLPRKLILGLTTLFFSIVFMMA 185
            LF+ F++SD++SLFS+ TS+LMFLGILTS+YAE  FL  LP KLI+GL+TLFFSI  MM 
Sbjct: 689  LFMVFIISDSISLFSATTSVLMFLGILTSQYAENKFLTRLPTKLIIGLSTLFFSIATMMI 748

Query: 186  AFCATLFIILHDGSLWVPILSTSLAISGPVVLFLMLQIRLLKDMIFSYYAPSIFRKK 356
            AFCA L I+L   S  V I+   L    PV LF++LQ  LL ++  S Y P IF +K
Sbjct: 749  AFCAALAILLKGRSTKVVIIPIILLACVPVTLFVLLQFPLLVEIFISTYGPGIFNRK 805


>ref|XP_002328475.1| predicted protein [Populus trichocarpa] gi|222838190|gb|EEE76555.1|
           predicted protein [Populus trichocarpa]
          Length = 543

 Score =  119 bits (299), Expect = 2e-25
 Identities = 67/115 (58%), Positives = 82/115 (71%), Gaps = 2/115 (1%)
 Frame = +3

Query: 9   FIFFMVSDALSLFSSCTSLLMFLGILTSRYAEQDFLLSLPRKLILGLTTLFFSIVFMMAA 188
           F+ FMVSDA+SLF+S +SLLMFLGILTSRY E+DFL SLP K+I+GL+ LFFSI  MM  
Sbjct: 420 FMVFMVSDAMSLFASTSSLLMFLGILTSRYREEDFLKSLPTKMIVGLSCLFFSIATMMIT 479

Query: 189 FCATLFIILHDGSLWV--PILSTSLAISGPVVLFLMLQIRLLKDMIFSYYAPSIF 347
           F  TLF++L D   W+  PI+   L  S PV LF +LQ  LL ++ FS Y P IF
Sbjct: 480 FGITLFMMLRDRFPWISFPII---LLASLPVTLFALLQFPLLVEIFFSTYGPGIF 531


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