BLASTX nr result

ID: Coptis23_contig00042138 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042138
         (303 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326135.1| predicted protein [Populus trichocarpa] gi|2...   122   3e-26
ref|XP_002893682.1| Beta-galactosidase 15 precursor [Arabidopsis...   122   4e-26
sp|Q9C6W4.1|BGL15_ARATH RecName: Full=Beta-galactosidase 15; Sho...   121   5e-26
ref|NP_683341.1| beta-galactosidase 15 [Arabidopsis thaliana] gi...   121   5e-26
ref|XP_002324727.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25

>ref|XP_002326135.1| predicted protein [Populus trichocarpa] gi|222833328|gb|EEE71805.1|
           predicted protein [Populus trichocarpa]
          Length = 824

 Score =  122 bits (306), Expect = 3e-26
 Identities = 63/100 (63%), Positives = 72/100 (72%)
 Frame = +3

Query: 3   NVDLQGDGKFFVPAWSVSILTDCKTEVYNTAKINTQTSIMVKKPNGAQNEPDFSKWEWKG 182
           +VDLQ DGK+FVPAWSVSIL DC  E YNTAK+N QTS++VKK +   + P    WEW  
Sbjct: 390 DVDLQQDGKYFVPAWSVSILQDCNKETYNTAKVNVQTSLIVKKLH-ENDTPLKLSWEWAP 448

Query: 183 EPIKDALGGNGGTSNSTQLLEQKAVTADSSDYLWYMTSVN 302
           EP K  L G GG   +TQLLEQKA T D SDYLWYMTSV+
Sbjct: 449 EPTKAPLHGQGG-FKATQLLEQKAATYDESDYLWYMTSVD 487


>ref|XP_002893682.1| Beta-galactosidase 15 precursor [Arabidopsis lyrata subsp. lyrata]
           gi|297339524|gb|EFH69941.1| Beta-galactosidase 15
           precursor [Arabidopsis lyrata subsp. lyrata]
          Length = 780

 Score =  122 bits (305), Expect = 4e-26
 Identities = 60/94 (63%), Positives = 68/94 (72%), Gaps = 1/94 (1%)
 Frame = +3

Query: 24  GKFF-VPAWSVSILTDCKTEVYNTAKINTQTSIMVKKPNGAQNEPDFSKWEWKGEPIKDA 200
           G F+ VPAWSVSIL DCKTE YNTAKINTQTS+MVKK N A+NEP   KW W+ E I + 
Sbjct: 386 GTFYDVPAWSVSILPDCKTETYNTAKINTQTSVMVKKANEAENEPSTLKWSWRPENIDNV 445

Query: 201 LGGNGGTSNSTQLLEQKAVTADSSDYLWYMTSVN 302
           L    G S   QL +QK V+ D SDYLWYMT+VN
Sbjct: 446 LLKGKGESTMRQLFDQKVVSNDESDYLWYMTTVN 479


>sp|Q9C6W4.1|BGL15_ARATH RecName: Full=Beta-galactosidase 15; Short=Lactase 15; Flags:
           Precursor gi|12597826|gb|AAG60136.1|AC074360_1
           hypothetical protein [Arabidopsis thaliana]
          Length = 779

 Score =  121 bits (304), Expect = 5e-26
 Identities = 60/99 (60%), Positives = 69/99 (69%)
 Frame = +3

Query: 6   VDLQGDGKFFVPAWSVSILTDCKTEVYNTAKINTQTSIMVKKPNGAQNEPDFSKWEWKGE 185
           ++ QG   + VPAWSVSIL DCKTE YNTAKINTQTS+MVKK N A+NEP   KW W+ E
Sbjct: 381 INFQGTS-YDVPAWSVSILPDCKTETYNTAKINTQTSVMVKKANEAENEPSTLKWSWRPE 439

Query: 186 PIKDALGGNGGTSNSTQLLEQKAVTADSSDYLWYMTSVN 302
            I   L    G S   QL +QK V+ D SDYLWYMT+VN
Sbjct: 440 NIDSVLLKGKGESTMRQLFDQKVVSNDESDYLWYMTTVN 478


>ref|NP_683341.1| beta-galactosidase 15 [Arabidopsis thaliana]
           gi|332193266|gb|AEE31387.1| beta-galactosidase 15
           [Arabidopsis thaliana]
          Length = 786

 Score =  121 bits (304), Expect = 5e-26
 Identities = 60/99 (60%), Positives = 69/99 (69%)
 Frame = +3

Query: 6   VDLQGDGKFFVPAWSVSILTDCKTEVYNTAKINTQTSIMVKKPNGAQNEPDFSKWEWKGE 185
           ++ QG   + VPAWSVSIL DCKTE YNTAKINTQTS+MVKK N A+NEP   KW W+ E
Sbjct: 404 INFQGTS-YDVPAWSVSILPDCKTETYNTAKINTQTSVMVKKANEAENEPSTLKWSWRPE 462

Query: 186 PIKDALGGNGGTSNSTQLLEQKAVTADSSDYLWYMTSVN 302
            I   L    G S   QL +QK V+ D SDYLWYMT+VN
Sbjct: 463 NIDSVLLKGKGESTMRQLFDQKVVSNDESDYLWYMTTVN 501


>ref|XP_002324727.1| predicted protein [Populus trichocarpa] gi|222866161|gb|EEF03292.1|
           predicted protein [Populus trichocarpa]
          Length = 749

 Score =  119 bits (297), Expect = 3e-25
 Identities = 59/100 (59%), Positives = 73/100 (73%)
 Frame = +3

Query: 3   NVDLQGDGKFFVPAWSVSILTDCKTEVYNTAKINTQTSIMVKKPNGAQNEPDFSKWEWKG 182
           NVDL  DGK+ +PAWSV+IL DC  E+YNTAK+NTQTSIMVKK +  +++P    W W  
Sbjct: 330 NVDLGQDGKYSLPAWSVTILQDCNKEIYNTAKVNTQTSIMVKKLH-EEDKPVQLSWTWAP 388

Query: 183 EPIKDALGGNGGTSNSTQLLEQKAVTADSSDYLWYMTSVN 302
           EP+K  L G  G   +T+LLEQK  T D++DYLWYMTSVN
Sbjct: 389 EPMKGVLQGK-GRFRATELLEQKETTVDTTDYLWYMTSVN 427


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