BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042125
         (394 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271987.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vit...   211   4e-53
ref|XP_002512252.1| 5'->3' exoribonuclease, putative [Ricinus co...   203   1e-50
ref|XP_002328516.1| predicted protein [Populus trichocarpa] gi|2...   201   7e-50
ref|XP_003556487.1| PREDICTED: 5'-3' exoribonuclease 4-like [Gly...   199   2e-49
ref|XP_003554686.1| PREDICTED: 5'-3' exoribonuclease 4-like [Gly...   199   2e-49

>ref|XP_002271987.2| PREDICTED: 5'-3' exoribonuclease 4-like [Vitis vinifera]
          Length = 950

 Score =  211 bits (538), Expect = 4e-53
 Identities = 104/133 (78%), Positives = 117/133 (87%), Gaps = 2/133 (1%)
 Frame = +1

Query: 1   REGAINLLMHVYKREFAAMGGYLTDAGEVLLERVEHFIQSVAMNEDKIFQKRGRIQQAQE 180
           REGAINLLMHVY+REF+AMGGYLTDAGEVLL+RVEHFI+SVA+ ED+IFQKR RIQQA E
Sbjct: 345 REGAINLLMHVYRREFSAMGGYLTDAGEVLLDRVEHFIESVAVYEDQIFQKRTRIQQALE 404

Query: 181 NNEQM--RMKRENPGEVRVTVSDKVKLGEPGYKERYYMEKFNLSNEDEIDEVKKDVVLKY 354
           NNE+M  R KRE   E R  V DKVKLGEPGYKERYY EKFNLSN +EID+V+K++V+KY
Sbjct: 405 NNEEMKLRTKREASEEPRAPVEDKVKLGEPGYKERYYTEKFNLSNPEEIDKVRKEIVMKY 464

Query: 355 VEGLCWVMRYYYQ 393
           VEGLCWV RYYYQ
Sbjct: 465 VEGLCWVCRYYYQ 477


>ref|XP_002512252.1| 5'->3' exoribonuclease, putative [Ricinus communis]
           gi|223548213|gb|EEF49704.1| 5'->3' exoribonuclease,
           putative [Ricinus communis]
          Length = 964

 Score =  203 bits (516), Expect = 1e-50
 Identities = 100/133 (75%), Positives = 114/133 (85%), Gaps = 2/133 (1%)
 Frame = +1

Query: 1   REGAINLLMHVYKREFAAMGGYLTDAGEVLLERVEHFIQSVAMNEDKIFQKRGRIQQAQE 180
           REGAINLLMHVY+REF+AMGGYLTDAGEV L+RVEHFIQSVA+ E++IFQKR RIQQ  E
Sbjct: 357 REGAINLLMHVYRREFSAMGGYLTDAGEVNLDRVEHFIQSVAIYEEQIFQKRTRIQQFLE 416

Query: 181 NNEQMRMK--RENPGEVRVTVSDKVKLGEPGYKERYYMEKFNLSNEDEIDEVKKDVVLKY 354
           NNE+MR+K  RE+  E++    DKVKLGEPGYKERYY EKF L+  DEID+V+ DVVLKY
Sbjct: 417 NNEEMRLKARRESSEEIQTPAVDKVKLGEPGYKERYYAEKFGLTTPDEIDKVRNDVVLKY 476

Query: 355 VEGLCWVMRYYYQ 393
           VEGLCWV RYYYQ
Sbjct: 477 VEGLCWVCRYYYQ 489


>ref|XP_002328516.1| predicted protein [Populus trichocarpa] gi|222838231|gb|EEE76596.1|
           predicted protein [Populus trichocarpa]
          Length = 948

 Score =  201 bits (510), Expect = 7e-50
 Identities = 99/133 (74%), Positives = 115/133 (86%), Gaps = 2/133 (1%)
 Frame = +1

Query: 1   REGAINLLMHVYKREFAAMGGYLTDAGEVLLERVEHFIQSVAMNEDKIFQKRGRIQQAQE 180
           REGAINLLMH+Y+REF+AMGGYLT AGEV L++VEHFIQSVA+ E++IFQKR RIQQA E
Sbjct: 357 REGAINLLMHIYRREFSAMGGYLTLAGEVFLDKVEHFIQSVAVYEEQIFQKRARIQQAFE 416

Query: 181 NNEQMRMK--RENPGEVRVTVSDKVKLGEPGYKERYYMEKFNLSNEDEIDEVKKDVVLKY 354
           NNE+M+ K  R+   E++    DKVKLGEPGYKERYY EKF+LSNE+EID+V KDVVLKY
Sbjct: 417 NNEEMKHKARRDLSEEIQAPPVDKVKLGEPGYKERYYAEKFDLSNEEEIDKVTKDVVLKY 476

Query: 355 VEGLCWVMRYYYQ 393
           VEGLCWV RYYYQ
Sbjct: 477 VEGLCWVCRYYYQ 489


>ref|XP_003556487.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
          Length = 931

 Score =  199 bits (506), Expect = 2e-49
 Identities = 95/133 (71%), Positives = 114/133 (85%), Gaps = 2/133 (1%)
 Frame = +1

Query: 1   REGAINLLMHVYKREFAAMGGYLTDAGEVLLERVEHFIQSVAMNEDKIFQKRGRIQQAQE 180
           REGAINLLMH+Y++EF A+GGYLTDAGEV L+RV+ FIQ V ++ED+IFQKR RIQ A E
Sbjct: 351 REGAINLLMHIYRKEFTAIGGYLTDAGEVFLDRVQRFIQFVTVHEDQIFQKRVRIQLAAE 410

Query: 181 NNEQMRMKR--ENPGEVRVTVSDKVKLGEPGYKERYYMEKFNLSNEDEIDEVKKDVVLKY 354
           NNE+MR +   E PGE R ++ DKVKLGEPGYKERYY+EKF +SN +EID++KKD+VLKY
Sbjct: 411 NNEEMRARARGEMPGEPRASLLDKVKLGEPGYKERYYVEKFGVSNLEEIDKIKKDIVLKY 470

Query: 355 VEGLCWVMRYYYQ 393
           VEGLCWV RYYYQ
Sbjct: 471 VEGLCWVCRYYYQ 483


>ref|XP_003554686.1| PREDICTED: 5'-3' exoribonuclease 4-like [Glycine max]
          Length = 957

 Score =  199 bits (505), Expect = 2e-49
 Identities = 96/133 (72%), Positives = 113/133 (84%), Gaps = 2/133 (1%)
 Frame = +1

Query: 1   REGAINLLMHVYKREFAAMGGYLTDAGEVLLERVEHFIQSVAMNEDKIFQKRGRIQQAQE 180
           REGA+NLLMH+Y++EF AMGGYLT+AGEV LERVEHFIQSVA++ED+IFQKR RIQQA E
Sbjct: 356 REGALNLLMHIYRKEFTAMGGYLTEAGEVFLERVEHFIQSVAVHEDQIFQKRVRIQQATE 415

Query: 181 NNEQM--RMKRENPGEVRVTVSDKVKLGEPGYKERYYMEKFNLSNEDEIDEVKKDVVLKY 354
            NE+M  R + + PGE R +V DKVKLGEPGYKERYY EKF   + ++ID++KKD VLKY
Sbjct: 416 INEEMKARARGDMPGEPRASVLDKVKLGEPGYKERYYAEKFGALDPEKIDKIKKDTVLKY 475

Query: 355 VEGLCWVMRYYYQ 393
           VEGLCWV RYYYQ
Sbjct: 476 VEGLCWVCRYYYQ 488