BLASTX nr result

ID: Coptis23_contig00042099 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042099
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284504.2| PREDICTED: two-component response regulator ...    82   3e-14
emb|CBI19004.3| unnamed protein product [Vitis vinifera]               81   8e-14
ref|XP_002513745.1| Two-component response regulator ARR9, putat...    79   5e-13
emb|CBX43985.1| putative A-type response regulator 3 [Populus x ...    77   2e-12
ref|XP_002302230.1| type-a response regulator [Populus trichocar...    77   2e-12

>ref|XP_002284504.2| PREDICTED: two-component response regulator ARR9-like [Vitis
           vinifera]
          Length = 240

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 43/61 (70%), Positives = 50/61 (81%), Gaps = 4/61 (6%)
 Frame = -3

Query: 173 MGFEADHEGTKYQ----QNFHVLAVDDSVTDRKLLEKLLTVSSYNVTCVDSADKALEYLG 6
           M  + D+E T+ Q    Q+FHVLAVDDS+ DRKLLEKLLTVSSY+VTCV+S DKALEYLG
Sbjct: 9   MEMKQDNESTQQQKQLEQHFHVLAVDDSLIDRKLLEKLLTVSSYHVTCVESGDKALEYLG 68

Query: 5   L 3
           L
Sbjct: 69  L 69


>emb|CBI19004.3| unnamed protein product [Vitis vinifera]
          Length = 232

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 42/56 (75%), Positives = 48/56 (85%), Gaps = 4/56 (7%)
 Frame = -3

Query: 158 DHEGTKYQ----QNFHVLAVDDSVTDRKLLEKLLTVSSYNVTCVDSADKALEYLGL 3
           D+E T+ Q    Q+FHVLAVDDS+ DRKLLEKLLTVSSY+VTCV+S DKALEYLGL
Sbjct: 4   DNESTQQQKQLEQHFHVLAVDDSLIDRKLLEKLLTVSSYHVTCVESGDKALEYLGL 59


>ref|XP_002513745.1| Two-component response regulator ARR9, putative [Ricinus communis]
           gi|223546831|gb|EEF48328.1| Two-component response
           regulator ARR9, putative [Ricinus communis]
          Length = 229

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 39/54 (72%), Positives = 44/54 (81%)
 Frame = -3

Query: 164 EADHEGTKYQQNFHVLAVDDSVTDRKLLEKLLTVSSYNVTCVDSADKALEYLGL 3
           E   +  + QQ+FHVLAVDDS+ DRKLLE+LL VSSY VTCVDS DKALEYLGL
Sbjct: 28  EQQQKQKQEQQHFHVLAVDDSLLDRKLLERLLRVSSYQVTCVDSGDKALEYLGL 81


>emb|CBX43985.1| putative A-type response regulator 3 [Populus x canadensis]
          Length = 242

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 38/54 (70%), Positives = 44/54 (81%)
 Frame = -3

Query: 164 EADHEGTKYQQNFHVLAVDDSVTDRKLLEKLLTVSSYNVTCVDSADKALEYLGL 3
           + D EG + +++FHVLAVDDS  DRKLLE+LL VSSY VT VDS DKALEYLGL
Sbjct: 33  QRDQEGEEEEKHFHVLAVDDSFIDRKLLERLLKVSSYQVTFVDSGDKALEYLGL 86


>ref|XP_002302230.1| type-a response regulator [Populus trichocarpa]
           gi|222843956|gb|EEE81503.1| type-a response regulator
           [Populus trichocarpa]
          Length = 243

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 38/54 (70%), Positives = 44/54 (81%)
 Frame = -3

Query: 164 EADHEGTKYQQNFHVLAVDDSVTDRKLLEKLLTVSSYNVTCVDSADKALEYLGL 3
           + D EG + +++FHVLAVDDS  DRKLLE+LL VSSY VT VDS DKALEYLGL
Sbjct: 34  QRDQEGEEEEKHFHVLAVDDSFIDRKLLERLLKVSSYQVTFVDSGDKALEYLGL 87


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