BLASTX nr result
ID: Coptis23_contig00042092
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00042092
(304 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera] 137 7e-31
ref|XP_004167430.1| PREDICTED: pentatricopeptide repeat-containi... 126 2e-27
ref|XP_004146805.1| PREDICTED: pentatricopeptide repeat-containi... 126 2e-27
gb|ABR16216.1| unknown [Picea sitchensis] 108 6e-22
emb|CBI24229.3| unnamed protein product [Vitis vinifera] 102 3e-20
>emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera]
Length = 1009
Score = 137 bits (346), Expect = 7e-31
Identities = 64/101 (63%), Positives = 81/101 (80%)
Frame = -1
Query: 304 ACSALEILGFGRMVHGYVVRNKLELDVFVGNALVDMYANCGDLGSSRRVFDLMPERDVVS 125
ACSA+ + G+MVHG+V+R +E DVFVGNAL+ Y+NCGDLGSSR VF M ERDVVS
Sbjct: 192 ACSAMLLXRIGKMVHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVS 251
Query: 124 WTALVSAYMDVGSLEEARDVFDSMPLNGVKPDVISWNALVS 2
WTAL+SAYM+ G +EA+ +F M L+GVKPD+ISW+AL+S
Sbjct: 252 WTALISAYMEEGLXDEAKHIFHLMQLDGVKPDLISWSALLS 292
Score = 79.0 bits (193), Expect = 4e-13
Identities = 40/99 (40%), Positives = 62/99 (62%)
Frame = -1
Query: 304 ACSALEILGFGRMVHGYVVRNKLELDVFVGNALVDMYANCGDLGSSRRVFDLMPERDVVS 125
AC+ L + G+ +HGY +RN E ++FV +ALVDMYA C D+ S+ +VF + R+ VS
Sbjct: 546 ACADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTVS 605
Query: 124 WTALVSAYMDVGSLEEARDVFDSMPLNGVKPDVISWNAL 8
W AL++ Y++ EEA +F M G++P I++ L
Sbjct: 606 WNALMAGYINNKQPEEALKLFLEMLGEGLQPSSITFMIL 644
Score = 77.0 bits (188), Expect = 1e-12
Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
Frame = -1
Query: 304 ACSALEILGFGRMVHGYVVRNKL-ELDVFVGNALVDMYANCGDLGSSRRVFDLMPERDVV 128
AC + + FGR +HGY + +L EL + +AL+DMYA CG + ++ VFD E+DV
Sbjct: 647 ACGDIAAIRFGRGLHGYAAKCQLDELKNAIXSALIDMYAKCGSILDAKSVFDSEVEKDVP 706
Query: 127 SWTALVSAYMDVGSLEEARDVFDSMPLNGVKPDVISWNALVS 2
W A++SA+ G A VF M L G+ PD I++ +L+S
Sbjct: 707 LWNAMISAFSVHGMARNAFAVFXQMELLGIXPDHITFVSLLS 748
Score = 73.9 bits (180), Expect = 1e-11
Identities = 31/101 (30%), Positives = 61/101 (60%)
Frame = -1
Query: 304 ACSALEILGFGRMVHGYVVRNKLELDVFVGNALVDMYANCGDLGSSRRVFDLMPERDVVS 125
AC+ L+ L G+ +H ++ + +V+V +++DMY+ CG + +VF ++
Sbjct: 363 ACTGLKALRLGKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFXKAENKNTAM 422
Query: 124 WTALVSAYMDVGSLEEARDVFDSMPLNGVKPDVISWNALVS 2
W +++AY++ G +E+A + SM +G KPDVI++N ++S
Sbjct: 423 WNEMIAAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILS 463
>ref|XP_004167430.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like, partial [Cucumis sativus]
Length = 406
Score = 126 bits (317), Expect = 2e-27
Identities = 59/101 (58%), Positives = 76/101 (75%)
Frame = -1
Query: 304 ACSALEILGFGRMVHGYVVRNKLELDVFVGNALVDMYANCGDLGSSRRVFDLMPERDVVS 125
ACS +++ G+M HGY +R ++ D+ + NAL+D Y NCGDL SS VFD M E+DVVS
Sbjct: 177 ACSRRQMVKTGKMAHGYAIRKRMVSDIVIENALMDFYGNCGDLSSSINVFDSMSEKDVVS 236
Query: 124 WTALVSAYMDVGSLEEARDVFDSMPLNGVKPDVISWNALVS 2
WTALVSAY++ G L EA +VF SM +G+KPD+ISWNALVS
Sbjct: 237 WTALVSAYIEEGLLNEAMEVFHSMQSSGLKPDLISWNALVS 277
>ref|XP_004146805.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g19720-like [Cucumis sativus]
Length = 677
Score = 126 bits (317), Expect = 2e-27
Identities = 59/101 (58%), Positives = 76/101 (75%)
Frame = -1
Query: 304 ACSALEILGFGRMVHGYVVRNKLELDVFVGNALVDMYANCGDLGSSRRVFDLMPERDVVS 125
ACS +++ G+M HGY +R ++ D+ + NAL+D Y NCGDL SS VFD M E+DVVS
Sbjct: 177 ACSRRQMVKTGKMAHGYAIRKRMVSDIVIENALMDFYGNCGDLSSSINVFDSMSEKDVVS 236
Query: 124 WTALVSAYMDVGSLEEARDVFDSMPLNGVKPDVISWNALVS 2
WTALVSAY++ G L EA +VF SM +G+KPD+ISWNALVS
Sbjct: 237 WTALVSAYIEEGLLNEAMEVFHSMQSSGLKPDLISWNALVS 277
Score = 79.3 bits (194), Expect = 3e-13
Identities = 35/101 (34%), Positives = 62/101 (61%)
Frame = -1
Query: 304 ACSALEILGFGRMVHGYVVRNKLELDVFVGNALVDMYANCGDLGSSRRVFDLMPERDVVS 125
AC+ L LG GR VH Y ++ +L +++V +LVDMY+ CG + +F ++++
Sbjct: 348 ACAGLRDLGLGRAVHAYALKCELCTNIYVEGSLVDMYSKCGQDDRAEEIFAKAEKKNITL 407
Query: 124 WTALVSAYMDVGSLEEARDVFDSMPLNGVKPDVISWNALVS 2
W +++ YM+ G A + F SM +G+KPDV+++N L++
Sbjct: 408 WNEIIATYMNQGKNSWALEHFRSMQHHGLKPDVVTYNTLLA 448
Score = 77.8 bits (190), Expect = 8e-13
Identities = 35/100 (35%), Positives = 64/100 (64%)
Frame = -1
Query: 304 ACSALEILGFGRMVHGYVVRNKLELDVFVGNALVDMYANCGDLGSSRRVFDLMPERDVVS 125
AC++L +L G+ +HGY++RN + F+ +AL++MYA CGD+ S+ +VF + R+VV
Sbjct: 529 ACASLNLLHKGKEIHGYMLRNYFVNNYFISSALINMYAKCGDIDSAIQVFSRIKNRNVVC 588
Query: 124 WTALVSAYMDVGSLEEARDVFDSMPLNGVKPDVISWNALV 5
W AL++ + + A ++F M + G+KP +++ L+
Sbjct: 589 WNALIAGLLRTMQHKMAVELFCQMLVEGIKPSSATFSILL 628
>gb|ABR16216.1| unknown [Picea sitchensis]
Length = 394
Score = 108 bits (269), Expect = 6e-22
Identities = 47/101 (46%), Positives = 69/101 (68%)
Frame = -1
Query: 304 ACSALEILGFGRMVHGYVVRNKLELDVFVGNALVDMYANCGDLGSSRRVFDLMPERDVVS 125
AC+ L L G+ +HGY++R L+L + VGNAL+DMYA CG +GS+++VFD M +RDVVS
Sbjct: 223 ACAQLSDLQQGKEIHGYIIRRGLDLGIVVGNALIDMYAKCGSIGSAQKVFDKMLQRDVVS 282
Query: 124 WTALVSAYMDVGSLEEARDVFDSMPLNGVKPDVISWNALVS 2
W ++ Y G +E ++F M G+K DVI+WN L++
Sbjct: 283 WNVAIAGYAQNGRFDECMELFRKMQCAGLKIDVITWNTLIT 323
Score = 79.0 bits (193), Expect = 4e-13
Identities = 38/95 (40%), Positives = 59/95 (62%)
Frame = -1
Query: 304 ACSALEILGFGRMVHGYVVRNKLELDVFVGNALVDMYANCGDLGSSRRVFDLMPERDVVS 125
AC+ L L G++++ ++ E+DV V NAL++M+ CG + +RRVFD M ER++VS
Sbjct: 122 ACARLASLSEGKLIYDEIISKGCEMDVIVENALINMFMKCGSIEDARRVFDKMCERNLVS 181
Query: 124 WTALVSAYMDVGSLEEARDVFDSMPLNGVKPDVIS 20
WTA+VS Y G +EA +F M VK + ++
Sbjct: 182 WTAMVSGYAQGGFADEALRMFYEMQGEDVKANYVT 216
>emb|CBI24229.3| unnamed protein product [Vitis vinifera]
Length = 547
Score = 102 bits (254), Expect = 3e-20
Identities = 44/100 (44%), Positives = 69/100 (69%)
Frame = -1
Query: 304 ACSALEILGFGRMVHGYVVRNKLELDVFVGNALVDMYANCGDLGSSRRVFDLMPERDVVS 125
ACS L G+ +HGY++RN++E D+FV ++L+D+Y CG++GS+ VF MP+ +VVS
Sbjct: 221 ACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNVVS 280
Query: 124 WTALVSAYMDVGSLEEARDVFDSMPLNGVKPDVISWNALV 5
W ++S Y+ VGS EA +F M GVKPD I++ +++
Sbjct: 281 WNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVL 320
Score = 67.8 bits (164), Expect = 9e-10
Identities = 32/100 (32%), Positives = 60/100 (60%)
Frame = -1
Query: 304 ACSALEILGFGRMVHGYVVRNKLELDVFVGNALVDMYANCGDLGSSRRVFDLMPERDVVS 125
+C+ L L G+ +H +VR+ LD FV +ALVDMY CG L ++ VF+ + ++VVS
Sbjct: 120 SCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVS 179
Query: 124 WTALVSAYMDVGSLEEARDVFDSMPLNGVKPDVISWNALV 5
W ++++ Y G + ++F M G++P + + ++++
Sbjct: 180 WNSMIAGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSIL 219