BLASTX nr result

ID: Coptis23_contig00042088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042088
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW78876.1| hypothetical protein ZEAMMB73_585526 [Zea mays]         68   7e-10
ref|NP_001056156.1| Os05g0535500 [Oryza sativa Japonica Group] g...    68   9e-10
gb|EGX48386.1| hypothetical protein AOL_s00080g15 [Arthrobotrys ...    67   1e-09
gb|EER38138.1| tRNA(His) guanylyltransferase [Ajellomyces capsul...    67   1e-09
emb|CCD46419.1| similar to tRNAHis guanylyltransferase Thg1 [Bot...    67   1e-09

>gb|AFW78876.1| hypothetical protein ZEAMMB73_585526 [Zea mays]
          Length = 518

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 39/64 (60%), Positives = 46/64 (71%), Gaps = 3/64 (4%)
 Frame = +1

Query: 124 MANSKYEYVKTEFEPDFETKLLPSTYIVIRIDG---HQFSEEQEFDKPNDPRALMSLMNA 294
           MANS+YEYVK EFE  F+  L PS +IV+RIDG   H+FS+   F+KPND  AL  LMNA
Sbjct: 1   MANSEYEYVKREFE--FDRCLPPSNWIVVRIDGCHFHRFSKVHAFEKPNDENAL-RLMNA 57

Query: 295 CAVA 306
           CA A
Sbjct: 58  CATA 61


>ref|NP_001056156.1| Os05g0535500 [Oryza sativa Japonica Group]
           gi|47900415|gb|AAT39209.1| putative tRNA His
           guanylyltransferase [Oryza sativa Japonica Group]
           gi|113579707|dbj|BAF18070.1| Os05g0535500 [Oryza sativa
           Japonica Group] gi|215693378|dbj|BAG88760.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 519

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 39/64 (60%), Positives = 47/64 (73%), Gaps = 3/64 (4%)
 Frame = +1

Query: 124 MANSKYEYVKTEFEPDFETKLLPSTYIVIRIDG---HQFSEEQEFDKPNDPRALMSLMNA 294
           MANS+YEYVK EFE D  + L PS +IV+RIDG   H+FS+   F+KPND RAL  LMNA
Sbjct: 1   MANSEYEYVKREFELD--SLLPPSNWIVVRIDGCHFHRFSKIHTFEKPNDERAL-RLMNA 57

Query: 295 CAVA 306
           CA +
Sbjct: 58  CATS 61


>gb|EGX48386.1| hypothetical protein AOL_s00080g15 [Arthrobotrys oligospora ATCC
           24927]
          Length = 318

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 40/64 (62%), Positives = 46/64 (71%), Gaps = 3/64 (4%)
 Frame = +1

Query: 124 MANSKYEYVKTEFEPDFETKLLPSTYIVIRIDG---HQFSEEQEFDKPNDPRALMSLMNA 294
           MANSK+EYV+  FE    T LLP+TYI+IRIDG   H+F+    F KPND RAL SLMNA
Sbjct: 1   MANSKFEYVR-HFELSNNTYLLPNTYIIIRIDGRSFHRFTTLHSFTKPNDSRAL-SLMNA 58

Query: 295 CAVA 306
            AVA
Sbjct: 59  AAVA 62


>gb|EER38138.1| tRNA(His) guanylyltransferase [Ajellomyces capsulatus H143]
          Length = 292

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 42/65 (64%), Positives = 49/65 (75%), Gaps = 5/65 (7%)
 Frame = +1

Query: 124 MANSKYEYVKTEFEPDFETKLLPSTYIVIRIDG---HQFSEEQEFDKPNDPRALMSLMN- 291
           MANSKYEYVKT FE D    LLP+T+IV+RIDG   H+FS+  +F KPND RAL +LMN 
Sbjct: 1   MANSKYEYVKT-FEQD--DSLLPNTWIVVRIDGRGFHRFSDRYKFQKPNDERAL-NLMNT 56

Query: 292 -ACAV 303
            ACAV
Sbjct: 57  AACAV 61


>emb|CCD46419.1| similar to tRNAHis guanylyltransferase Thg1 [Botryotinia
           fuckeliana]
          Length = 291

 Score = 67.0 bits (162), Expect = 1e-09
 Identities = 38/64 (59%), Positives = 47/64 (73%), Gaps = 3/64 (4%)
 Frame = +1

Query: 124 MANSKYEYVKTEFEPDFETKLLPSTYIVIRIDG---HQFSEEQEFDKPNDPRALMSLMNA 294
           MANSKYEYVK   +PD    L+P+T+IV+RIDG   H+FS++  F+KPND RAL  LMNA
Sbjct: 1   MANSKYEYVKAFEQPDL---LIPNTWIVVRIDGRGFHKFSDKYAFEKPNDRRAL-DLMNA 56

Query: 295 CAVA 306
            A A
Sbjct: 57  AAKA 60


Top