BLASTX nr result

ID: Coptis23_contig00042085 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042085
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149748.1| PREDICTED: endoglucanase 6-like [Cucumis sat...    86   2e-23
emb|CAI68019.1| endo-beta-1,4-glucanase [Prunus persica]               86   7e-23
emb|CAI68020.1| endo-beta-1,4-glucanase [Prunus persica]               86   7e-23
gb|AFZ78641.1| korrigan [Populus tomentosa]                            85   3e-22
ref|XP_002303645.1| glycosyl hydrolase family 9 [Populus trichoc...    85   3e-22

>ref|XP_004149748.1| PREDICTED: endoglucanase 6-like [Cucumis sativus]
           gi|449505061|ref|XP_004162365.1| PREDICTED:
           endoglucanase 6-like [Cucumis sativus]
          Length = 619

 Score = 85.9 bits (211), Expect(2) = 2e-23
 Identities = 43/67 (64%), Positives = 51/67 (76%), Gaps = 2/67 (2%)
 Frame = +2

Query: 2   GAIVCGPDAYNNFGDHGDNYEQTEPATYNNAPLLGLLARLNSPHTAYDQLLS--LPEGSL 175
           GA+V GPDAY+NF D  DNYEQTEPATYNNAP+LG+LARL+  H+ Y+QLL   LP  + 
Sbjct: 448 GALVGGPDAYDNFADQRDNYEQTEPATYNNAPILGILARLSGGHSGYNQLLPVLLPPVNH 507

Query: 176 LTPPAQS 196
             P AQS
Sbjct: 508 PDPSAQS 514



 Score = 48.1 bits (113), Expect(2) = 2e-23
 Identities = 20/42 (47%), Positives = 29/42 (69%)
 Frame = +3

Query: 189 HNPMPQLKPTSASAPAESFVPITVEQKVSASWIYKGSTYYKY 314
           ++P P  +  +  +PA S  PITVEQK++ SW  KG+TYY+Y
Sbjct: 506 NHPDPSAQSKTLPSPASSSTPITVEQKMTTSWTAKGNTYYRY 547


>emb|CAI68019.1| endo-beta-1,4-glucanase [Prunus persica]
          Length = 620

 Score = 86.3 bits (212), Expect(2) = 7e-23
 Identities = 40/51 (78%), Positives = 44/51 (86%)
 Frame = +2

Query: 2   GAIVCGPDAYNNFGDHGDNYEQTEPATYNNAPLLGLLARLNSPHTAYDQLL 154
           GAIV GPDAY+NF D  DNYEQTEPATYNNAPLLG+LARLN+ H  Y+QLL
Sbjct: 451 GAIVGGPDAYDNFADQRDNYEQTEPATYNNAPLLGILARLNAGHGGYNQLL 501



 Score = 45.8 bits (107), Expect(2) = 7e-23
 Identities = 19/40 (47%), Positives = 28/40 (70%)
 Frame = +3

Query: 195 PMPQLKPTSASAPAESFVPITVEQKVSASWIYKGSTYYKY 314
           P+P++ P    APA S  PI ++QK++ SW+ KG TYY+Y
Sbjct: 512 PLPKITPV---APASSSSPIAIQQKLTTSWVSKGVTYYRY 548


>emb|CAI68020.1| endo-beta-1,4-glucanase [Prunus persica]
          Length = 620

 Score = 86.3 bits (212), Expect(2) = 7e-23
 Identities = 40/51 (78%), Positives = 44/51 (86%)
 Frame = +2

Query: 2   GAIVCGPDAYNNFGDHGDNYEQTEPATYNNAPLLGLLARLNSPHTAYDQLL 154
           GAIV GPDAY+NF D  DNYEQTEPATYNNAPLLG+LARLN+ H  Y+QLL
Sbjct: 451 GAIVGGPDAYDNFADQRDNYEQTEPATYNNAPLLGILARLNAGHGGYNQLL 501



 Score = 45.8 bits (107), Expect(2) = 7e-23
 Identities = 19/40 (47%), Positives = 28/40 (70%)
 Frame = +3

Query: 195 PMPQLKPTSASAPAESFVPITVEQKVSASWIYKGSTYYKY 314
           P+P++ P    APA S  PI ++QK++ SW+ KG TYY+Y
Sbjct: 512 PLPKITPV---APASSSSPIAIQQKLTTSWVSKGVTYYRY 548


>gb|AFZ78641.1| korrigan [Populus tomentosa]
          Length = 622

 Score = 84.7 bits (208), Expect(2) = 3e-22
 Identities = 40/51 (78%), Positives = 43/51 (84%)
 Frame = +2

Query: 2   GAIVCGPDAYNNFGDHGDNYEQTEPATYNNAPLLGLLARLNSPHTAYDQLL 154
           GAIV GPDAY+NF D  DNYEQTEPATYNNAPLLGLLARL+  H  Y+QLL
Sbjct: 451 GAIVGGPDAYDNFADERDNYEQTEPATYNNAPLLGLLARLSGGHGGYNQLL 501



 Score = 45.4 bits (106), Expect(2) = 3e-22
 Identities = 20/44 (45%), Positives = 29/44 (65%)
 Frame = +3

Query: 183 LQHNPMPQLKPTSASAPAESFVPITVEQKVSASWIYKGSTYYKY 314
           ++  P PQ K T A  PA +  PI++ QK++ +WI KG TYY+Y
Sbjct: 509 IEKKPAPQSKVTPA--PASTSAPISIAQKMTTTWIAKGKTYYRY 550


>ref|XP_002303645.1| glycosyl hydrolase family 9 [Populus trichocarpa]
           gi|222841077|gb|EEE78624.1| glycosyl hydrolase family 9
           [Populus trichocarpa] gi|347466589|gb|AEO97207.1|
           endo-1,4-beta-glucanase [Populus trichocarpa]
           gi|347466643|gb|AEO97234.1| endo-1,4-beta-glucanase
           [Populus trichocarpa]
          Length = 622

 Score = 84.7 bits (208), Expect(2) = 3e-22
 Identities = 40/51 (78%), Positives = 43/51 (84%)
 Frame = +2

Query: 2   GAIVCGPDAYNNFGDHGDNYEQTEPATYNNAPLLGLLARLNSPHTAYDQLL 154
           GAIV GPDAY+NF D  DNYEQTEPATYNNAPLLGLLARL+  H  Y+QLL
Sbjct: 451 GAIVGGPDAYDNFADERDNYEQTEPATYNNAPLLGLLARLSGGHGGYNQLL 501



 Score = 45.4 bits (106), Expect(2) = 3e-22
 Identities = 20/44 (45%), Positives = 29/44 (65%)
 Frame = +3

Query: 183 LQHNPMPQLKPTSASAPAESFVPITVEQKVSASWIYKGSTYYKY 314
           ++  P PQ K T A  PA +  PI++ QK++ +WI KG TYY+Y
Sbjct: 509 IEKKPAPQSKVTPA--PASTSAPISIAQKMTTTWIAKGKTYYRY 550


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