BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042065
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD19758.1| putative Ty3-gypsy-like retroelement pol polyprot...    76   3e-12
ref|XP_004140476.1| PREDICTED: uncharacterized protein LOC101221...    75   6e-12
ref|XP_003537359.1| PREDICTED: uncharacterized protein LOC100786...    72   5e-11
ref|XP_002329042.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11
emb|CAN70290.1| hypothetical protein VITISV_019345 [Vitis vinifera]    71   1e-10

>gb|AAD19758.1| putative Ty3-gypsy-like retroelement pol polyprotein [Arabidopsis
           thaliana]
          Length = 587

 Score = 76.3 bits (186), Expect = 3e-12
 Identities = 35/134 (26%), Positives = 70/134 (52%)
 Frame = +2

Query: 2   KYRGERCLKCGDPNHTSAQCRQKEVLGYVDHAPDMDTXXXXXXXXXXXXXXPSYDIHDIV 181
           K + + C +C   +H S+ C  +  + +++   +++                     +  
Sbjct: 150 KKQVKMCFRCQGQDHRSSVCPSRRTVAFLEEEEELEEEDEYAEVEFA---------EEES 200

Query: 182 GEHFMGICRPLFLANRSPSQRHSIFHSKCSIAGKICTLIVDSGSTENFISSEVVKKLQLP 361
            E    + + + L+++   QR ++F ++CSI  K+C LIVD GS+EN +S ++V+ L+LP
Sbjct: 201 NEMINLVLQRILLSSKEEGQRRNLFRTRCSINDKVCNLIVDIGSSENLVSQKLVEYLKLP 260

Query: 362 IITHPQPYSIGWIT 403
              H +PYS+GW++
Sbjct: 261 TTLHQKPYSLGWVS 274


>ref|XP_004140476.1| PREDICTED: uncharacterized protein LOC101221994 [Cucumis sativus]
          Length = 1544

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 2/130 (1%)
 Frame = +2

Query: 17  RCLKCGDPNHTSAQCRQKEVLGYVDHAPDMDTXXXXXXXXXXXXXXPSYDIHDIVGEHFM 196
           +C +CG   H S  C Q++ +   +                              GE   
Sbjct: 475 KCFRCGQTGHLSNNCPQRKTIAIAEEGGQTSEDSIEAEEETELIEADD-------GERVS 527

Query: 197 GICRPLFLANRSPS--QRHSIFHSKCSIAGKICTLIVDSGSTENFISSEVVKKLQLPIIT 370
            + + L +  +     QRH +F ++C+I G++C +I+DSGS+ENF++ ++V  L L    
Sbjct: 528 CVIQRLLITPKEEKNLQRHCLFKTRCTINGRVCDVIIDSGSSENFVAKKLVTVLNLKAEA 587

Query: 371 HPQPYSIGWI 400
           HP PY IGW+
Sbjct: 588 HPNPYKIGWV 597


>ref|XP_003537359.1| PREDICTED: uncharacterized protein LOC100786304 [Glycine max]
          Length = 1317

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 43/141 (30%), Positives = 64/141 (45%), Gaps = 5/141 (3%)
 Frame = +2

Query: 2    KYRGERCLKCGDPNHTSAQCRQKE--VLGYVDHAPDMDTXXXXXXXXXXXXXXPSYD--- 166
            K R  +C KC    H + +C  K   VL   ++  + D               P  D   
Sbjct: 629  KSRDVKCFKCQGLGHYAYECPNKRSMVLRDGEYISESDVEEEEESEYVEEEETPEGDLLM 688

Query: 167  IHDIVGEHFMGICRPLFLANRSPSQRHSIFHSKCSIAGKICTLIVDSGSTENFISSEVVK 346
            I  ++G           L +   SQR +IFH++C I GK+C +I+D GS  N  S+ +V 
Sbjct: 689  IRRLLGSQ---------LKHEEESQRENIFHTRCLINGKVCMVIIDGGSCTNVASARLVS 739

Query: 347  KLQLPIITHPQPYSIGWITND 409
            KL L    HP+PY + W++ D
Sbjct: 740  KLNLATKPHPRPYKLQWLSKD 760


>ref|XP_002329042.1| predicted protein [Populus trichocarpa] gi|222839713|gb|EEE78036.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 43/133 (32%), Positives = 62/133 (46%), Gaps = 9/133 (6%)
 Frame = +2

Query: 11  GERCLKCGDPNHTSAQCRQKEVLGYVDHAPDMDTXXXXXXXXXXXXXXPSYDIHDIVGEH 190
           G RC  CG+  H  A+C++ +  G      +++               P YD      E 
Sbjct: 319 GFRCFNCGELGHRFAECKKGQRRGLFSDVEEINREQEGDVEAE-----PVYDEE----ER 369

Query: 191 FMGICRPLFLANRSPSQRH---------SIFHSKCSIAGKICTLIVDSGSTENFISSEVV 343
             G   P+ +  RS    H         ++F S C+I+GKIC  IVDSGS EN +S EVV
Sbjct: 370 LEGDAGPMLMIRRSCLAPHVVEDDWLRTNVFQSTCTISGKICRFIVDSGSCENIVSEEVV 429

Query: 344 KKLQLPIITHPQP 382
           +KL +   +HP+P
Sbjct: 430 RKLHMATESHPRP 442


>emb|CAN70290.1| hypothetical protein VITISV_019345 [Vitis vinifera]
          Length = 1464

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
 Frame = +2

Query: 179 VGEHFMGICRPLFLANRSP--SQRHSIFHSKCSIAGKICTLIVDSGSTENFISSEVVKKL 352
           VGE    I + L L  +    SQRH IF ++C+I  K+C +I+DSGS+ENF+S  +VK L
Sbjct: 721 VGEEVTCIVQRLLLTLKKSDDSQRHKIFRTQCTIRNKVCNVIIDSGSSENFVSKALVKAL 780

Query: 353 QLPIITHPQPYSIGWI 400
            L    HP  Y I WI
Sbjct: 781 NLKTKEHPSSYKIAWI 796