BLASTX nr result

ID: Coptis23_contig00042024 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00042024
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276076.2| PREDICTED: BTB/POZ domain-containing protein...    96   2e-18
ref|XP_002511953.1| conserved hypothetical protein [Ricinus comm...    96   4e-18
ref|XP_002299498.1| predicted protein [Populus trichocarpa] gi|2...    94   1e-17
ref|XP_003532428.1| PREDICTED: uncharacterized protein LOC100775...    92   6e-17
ref|XP_003524445.1| PREDICTED: uncharacterized protein LOC100815...    91   7e-17

>ref|XP_002276076.2| PREDICTED: BTB/POZ domain-containing protein POB1-like [Vitis
           vinifera]
          Length = 722

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 45/100 (45%), Positives = 70/100 (70%)
 Frame = -3

Query: 331 PGYTMVTPVIGFMVYNATNVSAYSIMKLNLTLMGEPISVHFPQFILPQGSNSTSIKCVRF 152
           PGYT+V+ V+G + Y+A+N+ A  I++L+L  MG+PISVHF + + P+G  S + +C   
Sbjct: 552 PGYTLVSSVVGLIAYDASNLDANRIVQLSLNTMGKPISVHFGKLLFPRGRKSEA-RCAAL 610

Query: 151 GEGASLEFSDMALNNVCSTRDQGHFSVVVPEVEKQKAKRS 32
               ++  SDM+L +VC +R+QGHFS+V+P  +KQK K S
Sbjct: 611 CANGTVYLSDMSLPSVCYSREQGHFSIVIPVKKKQKWKSS 650


>ref|XP_002511953.1| conserved hypothetical protein [Ricinus communis]
           gi|223549133|gb|EEF50622.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 275

 Score = 95.5 bits (236), Expect = 4e-18
 Identities = 44/110 (40%), Positives = 69/110 (62%)
 Frame = -3

Query: 331 PGYTMVTPVIGFMVYNATNVSAYSIMKLNLTLMGEPISVHFPQFILPQGSNSTSIKCVRF 152
           PGY++V PV+GFM Y+A+N+S      L L++MG+ I V F + +   G N   +KCV+ 
Sbjct: 102 PGYSLVAPVVGFMAYDASNLSLLGREMLQLSIMGDSIVVKFSKIVRKDG-NPEDLKCVKI 160

Query: 151 GEGASLEFSDMALNNVCSTRDQGHFSVVVPEVEKQKAKRSKERLWKWLVI 2
           GEG +++F ++   N C  +  GHFS+VVP + + K K++    W+W VI
Sbjct: 161 GEGGTVQFRNVTEGNTCLAQSDGHFSLVVPSLSESKVKKT----WEWWVI 206


>ref|XP_002299498.1| predicted protein [Populus trichocarpa] gi|222846756|gb|EEE84303.1|
           predicted protein [Populus trichocarpa]
          Length = 295

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 44/110 (40%), Positives = 65/110 (59%)
 Frame = -3

Query: 331 PGYTMVTPVIGFMVYNATNVSAYSIMKLNLTLMGEPISVHFPQFILPQGSNSTSIKCVRF 152
           PGY+M+TPV+GFMV+NA+N  A  I K++L   G+ I + F    + +   S+  KCV F
Sbjct: 118 PGYSMITPVVGFMVFNASNARAKRIGKVSLNTSGKAIVIRFANSTITESMISSGAKCVTF 177

Query: 151 GEGASLEFSDMALNNVCSTRDQGHFSVVVPEVEKQKAKRSKERLWKWLVI 2
               +    ++ L N C ++D GHFS+VVP+ E+    R K+ LW   VI
Sbjct: 178 SASGTFHLGEINLLNECHSQDHGHFSIVVPQEERSGRDRRKQSLWYLWVI 227


>ref|XP_003532428.1| PREDICTED: uncharacterized protein LOC100775907 [Glycine max]
          Length = 300

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 44/99 (44%), Positives = 70/99 (70%), Gaps = 3/99 (3%)
 Frame = -3

Query: 331 PGYTMVTPVIGFMVYNATNVSAYSIMKLNLTLMGEPISVHFPQF-ILPQGSNS--TSIKC 161
           PGY+ ++ V+GFMV++A+NV+  S   L L  MG+PIS+ FP    + +GSNS  T ++C
Sbjct: 127 PGYSFISSVVGFMVFDASNVTDTSERNLTLNTMGQPISIQFPNITFMARGSNSINTRVRC 186

Query: 160 VRFGEGASLEFSDMALNNVCSTRDQGHFSVVVPEVEKQK 44
           V F +  + + ++M+   VC++RDQGHFSVV+P +EK++
Sbjct: 187 VAFNDNGTFQLTEMSSPGVCNSRDQGHFSVVLP-LEKRR 224


>ref|XP_003524445.1| PREDICTED: uncharacterized protein LOC100815056 [Glycine max]
          Length = 297

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 46/106 (43%), Positives = 71/106 (66%), Gaps = 1/106 (0%)
 Frame = -3

Query: 331 PGYTMVTPVIGFMVYNATNVSAYSIMKLNLTLMGEPISVHFPQF-ILPQGSNSTSIKCVR 155
           PGY++++ V+GFMV++A+NV+  S   + L  MG+PISV FP    + +GS +T ++CV 
Sbjct: 126 PGYSLISSVVGFMVFDASNVTDTSERNITLNTMGQPISVQFPNVTFMGRGSINTRVRCVA 185

Query: 154 FGEGASLEFSDMALNNVCSTRDQGHFSVVVPEVEKQKAKRSKERLW 17
           F    + + ++M+   VC++RDQGHFSVV+P +EK   KR    LW
Sbjct: 186 FNANGTFQLTEMSSPGVCNSRDQGHFSVVLP-LEK---KRGTWYLW 227


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