BLASTX nr result

ID: Coptis23_contig00041981 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041981
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16404.3| unnamed protein product [Vitis vinifera]              139   3e-31
ref|XP_002282950.1| PREDICTED: protein TRANSPARENT TESTA 1 [Viti...   139   3e-31
ref|XP_002304767.1| predicted protein [Populus trichocarpa] gi|2...   135   3e-30
ref|XP_002513471.1| TRANSPARENT TESTA 1 protein, putative [Ricin...   134   1e-29
ref|XP_003553422.1| PREDICTED: protein TRANSPARENT TESTA 1-like ...   133   2e-29

>emb|CBI16404.3| unnamed protein product [Vitis vinifera]
          Length = 360

 Score =  139 bits (349), Expect = 3e-31
 Identities = 61/71 (85%), Positives = 64/71 (90%)
 Frame = -3

Query: 270 KAFAVRGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIKAFGDGHSAYNADYMEEDDEIA 91
           KAFAVRGDWRTHEKNCGKLWYC CGSDFKHKRSLKDHIKAFG GH+AY  D  EE+DE A
Sbjct: 263 KAFAVRGDWRTHEKNCGKLWYCACGSDFKHKRSLKDHIKAFGHGHAAYGIDCFEEEDEPA 322

Query: 90  SEVEQDNESSH 58
           SE+EQDNESSH
Sbjct: 323 SEIEQDNESSH 333


>ref|XP_002282950.1| PREDICTED: protein TRANSPARENT TESTA 1 [Vitis vinifera]
          Length = 334

 Score =  139 bits (349), Expect = 3e-31
 Identities = 61/71 (85%), Positives = 64/71 (90%)
 Frame = -3

Query: 270 KAFAVRGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIKAFGDGHSAYNADYMEEDDEIA 91
           KAFAVRGDWRTHEKNCGKLWYC CGSDFKHKRSLKDHIKAFG GH+AY  D  EE+DE A
Sbjct: 263 KAFAVRGDWRTHEKNCGKLWYCACGSDFKHKRSLKDHIKAFGHGHAAYGIDCFEEEDEPA 322

Query: 90  SEVEQDNESSH 58
           SE+EQDNESSH
Sbjct: 323 SEIEQDNESSH 333


>ref|XP_002304767.1| predicted protein [Populus trichocarpa] gi|222842199|gb|EEE79746.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score =  135 bits (340), Expect = 3e-30
 Identities = 59/70 (84%), Positives = 64/70 (91%)
 Frame = -3

Query: 270 KAFAVRGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIKAFGDGHSAYNADYMEEDDEIA 91
           KAFAVRGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIK+FG GHSA   D+ EEDDE A
Sbjct: 174 KAFAVRGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIKSFGHGHSANGIDFFEEDDEPA 233

Query: 90  SEVEQDNESS 61
           SE+EQDN+S+
Sbjct: 234 SEIEQDNDST 243


>ref|XP_002513471.1| TRANSPARENT TESTA 1 protein, putative [Ricinus communis]
           gi|223547379|gb|EEF48874.1| TRANSPARENT TESTA 1 protein,
           putative [Ricinus communis]
          Length = 336

 Score =  134 bits (336), Expect = 1e-29
 Identities = 58/70 (82%), Positives = 64/70 (91%)
 Frame = -3

Query: 270 KAFAVRGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIKAFGDGHSAYNADYMEEDDEIA 91
           KAFAVRGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIK+FG GH+AY  D  EE++E A
Sbjct: 266 KAFAVRGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIKSFGHGHAAYGIDSFEEEEEPA 325

Query: 90  SEVEQDNESS 61
           SE+EQDNES+
Sbjct: 326 SEIEQDNEST 335


>ref|XP_003553422.1| PREDICTED: protein TRANSPARENT TESTA 1-like [Glycine max]
          Length = 349

 Score =  133 bits (334), Expect = 2e-29
 Identities = 59/70 (84%), Positives = 62/70 (88%)
 Frame = -3

Query: 270 KAFAVRGDWRTHEKNCGKLWYCTCGSDFKHKRSLKDHIKAFGDGHSAYNADYMEEDDEIA 91
           KAFAVRGDWRTHEKNCGKLWYC CGSDFKHKRSLKDHIKAFG GH+AY  D  EE+DE A
Sbjct: 278 KAFAVRGDWRTHEKNCGKLWYCICGSDFKHKRSLKDHIKAFGSGHAAYGIDGFEEEDEPA 337

Query: 90  SEVEQDNESS 61
           SEVEQDN+ S
Sbjct: 338 SEVEQDNDDS 347


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