BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041975
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_817236.1| ORF58d [Pinus koraiensis] gi|29469754|gb|AAO740...    74   2e-11
ref|YP_006503856.1| ribosomal protein L2 (chloroplast) [Datura s...    68   7e-10
ref|XP_004173990.1| PREDICTED: 50S ribosomal protein L2, chlorop...    67   2e-09
ref|YP_173359.1| hypothetical protein NitaMp011 [Nicotiana tabac...    67   2e-09
gb|AEO13832.1| ribosomal protein L2 [Camellia sinensis]                67   2e-09

>ref|NP_817236.1| ORF58d [Pinus koraiensis] gi|29469754|gb|AAO74082.1| ORF58d [Pinus
           koraiensis]
          Length = 58

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 34/52 (65%), Positives = 42/52 (80%)
 Frame = +3

Query: 168 LGFAVNLIGYFQLRKSIVQTALKGRAFPIEIGTSVPETMVSPIIAPLGCKIY 323
           +GFAVN IG F+ RK I+QTAL+GR FPI+IG   PE +VSPI+ PLGC+IY
Sbjct: 1   MGFAVNPIGCFRSRKLIIQTALRGRTFPIDIGAFGPERIVSPIMTPLGCRIY 52


>ref|YP_006503856.1| ribosomal protein L2 (chloroplast) [Datura stramonium]
           gi|350996490|gb|AEQ37002.1| ribosomal protein L2
           (chloroplast) [Datura stramonium]
           gi|350996578|gb|AEQ37089.1| ribosomal protein L2 [Datura
           stramonium]
          Length = 268

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 33/38 (86%), Positives = 35/38 (92%)
 Frame = -3

Query: 322 YILHPRGAIIGDTIVSGTEVPISMGNALPLSAV*TIDL 209
           YILHPRGAIIGDTIVSGTEVPI MGNALPLSAV  I++
Sbjct: 101 YILHPRGAIIGDTIVSGTEVPIKMGNALPLSAVHNIEI 138


>ref|XP_004173990.1| PREDICTED: 50S ribosomal protein L2, chloroplastic-like [Cucumis
           sativus]
          Length = 133

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/33 (96%), Positives = 32/33 (96%)
 Frame = -3

Query: 322 YILHPRGAIIGDTIVSGTEVPISMGNALPLSAV 224
           YILHPRGAIIGDTIVSGTEVPI MGNALPLSAV
Sbjct: 101 YILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV 133


>ref|YP_173359.1| hypothetical protein NitaMp011 [Nicotiana tabacum]
           gi|56806521|dbj|BAD83422.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 133

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/33 (96%), Positives = 32/33 (96%)
 Frame = -3

Query: 322 YILHPRGAIIGDTIVSGTEVPISMGNALPLSAV 224
           YILHPRGAIIGDTIVSGTEVPI MGNALPLSAV
Sbjct: 101 YILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV 133


>gb|AEO13832.1| ribosomal protein L2 [Camellia sinensis]
          Length = 133

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 32/33 (96%), Positives = 32/33 (96%)
 Frame = -3

Query: 322 YILHPRGAIIGDTIVSGTEVPISMGNALPLSAV 224
           YILHPRGAIIGDTIVSGTEVPI MGNALPLSAV
Sbjct: 101 YILHPRGAIIGDTIVSGTEVPIKMGNALPLSAV 133