BLASTX nr result

ID: Coptis23_contig00041972 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041972
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548592.1| PREDICTED: BTB/POZ domain-containing protein...    62   2e-13
gb|ADN34171.1| ATPOB protein binding [Cucumis melo subsp. melo]        61   2e-13
ref|XP_004138465.1| PREDICTED: BTB/POZ domain-containing protein...    60   2e-13
ref|XP_003528818.1| PREDICTED: BTB/POZ domain-containing protein...    62   2e-13
ref|XP_004138466.1| PREDICTED: BTB/POZ domain-containing protein...    60   2e-13

>ref|XP_003548592.1| PREDICTED: BTB/POZ domain-containing protein POB1-like [Glycine
           max]
          Length = 553

 Score = 61.6 bits (148), Expect(2) = 2e-13
 Identities = 29/41 (70%), Positives = 32/41 (78%)
 Frame = -2

Query: 262 GMQEKGSESFLVEYEFAARFRPAEEFMTTYKHQYKLTGGKA 140
           GMQEKGS SF V+YEFAAR RP EEF++ YK  Y  TGGKA
Sbjct: 476 GMQEKGSVSFAVDYEFAARSRPTEEFVSKYKGNYVFTGGKA 516



 Score = 38.9 bits (89), Expect(2) = 2e-13
 Identities = 18/33 (54%), Positives = 23/33 (69%)
 Frame = -3

Query: 135 RNLFTTNWESVVSGESSCFINGILQLRAVLTLK 37
           RNLF   W S ++ +S  FING+L LRA LT+K
Sbjct: 520 RNLFAIPWTSFMAEDSLYFINGVLHLRAELTIK 552


>gb|ADN34171.1| ATPOB protein binding [Cucumis melo subsp. melo]
          Length = 552

 Score = 60.8 bits (146), Expect(2) = 2e-13
 Identities = 28/41 (68%), Positives = 32/41 (78%)
 Frame = -2

Query: 262 GMQEKGSESFLVEYEFAARFRPAEEFMTTYKHQYKLTGGKA 140
           GMQEKGS SF V+YEFAAR +P EEF++ YK  Y  TGGKA
Sbjct: 475 GMQEKGSVSFAVDYEFAARSKPTEEFVSKYKGNYTFTGGKA 515



 Score = 39.7 bits (91), Expect(2) = 2e-13
 Identities = 18/34 (52%), Positives = 24/34 (70%)
 Frame = -3

Query: 135 RNLFTTNWESVVSGESSCFINGILQLRAVLTLKS 34
           RNLF   W S ++ +S  FING+L LRA LT++S
Sbjct: 519 RNLFAIPWTSFMAEDSHYFINGVLHLRAELTIRS 552


>ref|XP_004138465.1| PREDICTED: BTB/POZ domain-containing protein POB1-like isoform 1
           [Cucumis sativus]
          Length = 552

 Score = 60.5 bits (145), Expect(2) = 2e-13
 Identities = 27/41 (65%), Positives = 33/41 (80%)
 Frame = -2

Query: 262 GMQEKGSESFLVEYEFAARFRPAEEFMTTYKHQYKLTGGKA 140
           GMQEKGS SF V+YEF+AR +P+EEF++ YK  Y  TGGKA
Sbjct: 475 GMQEKGSVSFAVDYEFSARSKPSEEFLSKYKGNYTFTGGKA 515



 Score = 40.0 bits (92), Expect(2) = 2e-13
 Identities = 20/34 (58%), Positives = 24/34 (70%)
 Frame = -3

Query: 135 RNLFTTNWESVVSGESSCFINGILQLRAVLTLKS 34
           RNLF   W S ++ +S  FINGIL LRA LT+KS
Sbjct: 519 RNLFGVPWTSFMAEDSVHFINGILHLRAELTIKS 552


>ref|XP_003528818.1| PREDICTED: BTB/POZ domain-containing protein POB1-like [Glycine
           max]
          Length = 550

 Score = 61.6 bits (148), Expect(2) = 2e-13
 Identities = 29/41 (70%), Positives = 32/41 (78%)
 Frame = -2

Query: 262 GMQEKGSESFLVEYEFAARFRPAEEFMTTYKHQYKLTGGKA 140
           GMQEKGS SF V+YEFAAR RP EEF++ YK  Y  TGGKA
Sbjct: 473 GMQEKGSVSFAVDYEFAARSRPTEEFVSKYKGNYVFTGGKA 513



 Score = 38.9 bits (89), Expect(2) = 2e-13
 Identities = 18/33 (54%), Positives = 23/33 (69%)
 Frame = -3

Query: 135 RNLFTTNWESVVSGESSCFINGILQLRAVLTLK 37
           RNLF   W S ++ +S  FING+L LRA LT+K
Sbjct: 517 RNLFAIPWTSFMAEDSLYFINGVLHLRAELTIK 549


>ref|XP_004138466.1| PREDICTED: BTB/POZ domain-containing protein POB1-like isoform 2
           [Cucumis sativus] gi|449495254|ref|XP_004159779.1|
           PREDICTED: BTB/POZ domain-containing protein POB1-like
           [Cucumis sativus]
          Length = 550

 Score = 60.5 bits (145), Expect(2) = 2e-13
 Identities = 27/41 (65%), Positives = 33/41 (80%)
 Frame = -2

Query: 262 GMQEKGSESFLVEYEFAARFRPAEEFMTTYKHQYKLTGGKA 140
           GMQEKGS SF V+YEF+AR +P+EEF++ YK  Y  TGGKA
Sbjct: 473 GMQEKGSVSFAVDYEFSARSKPSEEFLSKYKGNYTFTGGKA 513



 Score = 40.0 bits (92), Expect(2) = 2e-13
 Identities = 20/34 (58%), Positives = 24/34 (70%)
 Frame = -3

Query: 135 RNLFTTNWESVVSGESSCFINGILQLRAVLTLKS 34
           RNLF   W S ++ +S  FINGIL LRA LT+KS
Sbjct: 517 RNLFGVPWTSFMAEDSVHFINGILHLRAELTIKS 550


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