BLASTX nr result

ID: Coptis23_contig00041970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041970
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305959.1| predicted protein [Populus trichocarpa] gi|2...   110   9e-23
ref|XP_002279543.2| PREDICTED: uncharacterized protein LOC100253...   109   2e-22
emb|CBI16864.3| unnamed protein product [Vitis vinifera]              109   2e-22
ref|XP_002525973.1| conserved hypothetical protein [Ricinus comm...   108   3e-22
ref|XP_003543904.1| PREDICTED: uncharacterized protein LOC100817...   105   5e-21

>ref|XP_002305959.1| predicted protein [Populus trichocarpa] gi|222848923|gb|EEE86470.1|
           predicted protein [Populus trichocarpa]
          Length = 674

 Score =  110 bits (276), Expect = 9e-23
 Identities = 57/85 (67%), Positives = 70/85 (82%)
 Frame = -2

Query: 264 KLQDRDLGQFLEKRRSLQVRKKVFDRTITELEQKAAEEAVGSEVLEKLGDLVKEREGIER 85
           KLQD+ LG FLEKRRSLQ++KK FDRTIT+LE+KAA EAV  EV+E++GDLV+ERE I R
Sbjct: 457 KLQDQGLGSFLEKRRSLQLKKKEFDRTITQLEKKAANEAVAHEVIEEIGDLVRERESISR 516

Query: 84  KLSTTYSFGKDRAKQPQVHSVLPLY 10
           KLSTTYS G+D  K  +  S+LP+Y
Sbjct: 517 KLSTTYSLGRD-GKGLRSESLLPVY 540


>ref|XP_002279543.2| PREDICTED: uncharacterized protein LOC100253124 [Vitis vinifera]
          Length = 647

 Score =  109 bits (273), Expect = 2e-22
 Identities = 59/85 (69%), Positives = 71/85 (83%)
 Frame = -2

Query: 264 KLQDRDLGQFLEKRRSLQVRKKVFDRTITELEQKAAEEAVGSEVLEKLGDLVKEREGIER 85
           KLQ +DLG+FLEKR SL+++KK FDRTITELE+KAAEEA  S VLEKLGDLV+EREGI+R
Sbjct: 455 KLQGQDLGKFLEKRHSLRLQKKEFDRTITELEKKAAEEASTSAVLEKLGDLVQEREGIQR 514

Query: 84  KLSTTYSFGKDRAKQPQVHSVLPLY 10
           KLSTTYS G+D     +  ++LPLY
Sbjct: 515 KLSTTYSLGRDVTGLHR-KTLLPLY 538


>emb|CBI16864.3| unnamed protein product [Vitis vinifera]
          Length = 1165

 Score =  109 bits (273), Expect = 2e-22
 Identities = 59/85 (69%), Positives = 71/85 (83%)
 Frame = -2

Query: 264 KLQDRDLGQFLEKRRSLQVRKKVFDRTITELEQKAAEEAVGSEVLEKLGDLVKEREGIER 85
           KLQ +DLG+FLEKR SL+++KK FDRTITELE+KAAEEA  S VLEKLGDLV+EREGI+R
Sbjct: 373 KLQGQDLGKFLEKRHSLRLQKKEFDRTITELEKKAAEEASTSAVLEKLGDLVQEREGIQR 432

Query: 84  KLSTTYSFGKDRAKQPQVHSVLPLY 10
           KLSTTYS G+D     +  ++LPLY
Sbjct: 433 KLSTTYSLGRDVTGLHR-KTLLPLY 456


>ref|XP_002525973.1| conserved hypothetical protein [Ricinus communis]
           gi|223534705|gb|EEF36397.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 579

 Score =  108 bits (271), Expect = 3e-22
 Identities = 57/83 (68%), Positives = 70/83 (84%)
 Frame = -2

Query: 264 KLQDRDLGQFLEKRRSLQVRKKVFDRTITELEQKAAEEAVGSEVLEKLGDLVKEREGIER 85
           KLQ +DL  FLE+RRSLQ +KK   RTITELEQKAAEEAVG++ +E+LGDLV+ER+GIER
Sbjct: 456 KLQRQDLAVFLERRRSLQRQKKELSRTITELEQKAAEEAVGNQAMEELGDLVRERQGIER 515

Query: 84  KLSTTYSFGKDRAKQPQVHSVLP 16
           KLSTTYS G+D A+  Q +S+LP
Sbjct: 516 KLSTTYSLGRDGARL-QSNSILP 537


>ref|XP_003543904.1| PREDICTED: uncharacterized protein LOC100817912 [Glycine max]
          Length = 582

 Score =  105 bits (261), Expect = 5e-21
 Identities = 55/84 (65%), Positives = 67/84 (79%)
 Frame = -2

Query: 264 KLQDRDLGQFLEKRRSLQVRKKVFDRTITELEQKAAEEAVGSEVLEKLGDLVKEREGIER 85
           KL+D+ LG FL+KR SL+++KK  DRTITELEQK AEE V +EV EKLGD+V+ERE IER
Sbjct: 455 KLKDQGLGSFLDKRCSLRLKKKALDRTITELEQKVAEETVDNEVFEKLGDIVRERECIER 514

Query: 84  KLSTTYSFGKDRAKQPQVHSVLPL 13
           KLSTTYS G+DR    +  SVLP+
Sbjct: 515 KLSTTYSLGRDRT-HSRPKSVLPV 537


Top