BLASTX nr result

ID: Coptis23_contig00041959 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041959
         (355 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519100.1| multidrug resistance pump, putative [Ricinus...   102   3e-20
ref|XP_002458553.1| hypothetical protein SORBIDRAFT_03g035610 [S...    91   1e-16
gb|AFW84961.1| putative MATE efflux family protein [Zea mays]          90   2e-16
ref|NP_001146663.1| uncharacterized protein LOC100280263 [Zea ma...    90   2e-16
gb|EEC71541.1| hypothetical protein OsI_03865 [Oryza sativa Indi...    90   2e-16

>ref|XP_002519100.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223541763|gb|EEF43311.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 496

 Score =  102 bits (254), Expect = 3e-20
 Identities = 49/85 (57%), Positives = 66/85 (77%)
 Frame = +1

Query: 100 LNLQVWALTIAMDPVQIYSVRVSNELGAARPKAAKFSILVTVSASVLVGILFMAIILASR 279
           +NLQ+W L IA+      SVRVSNELGA  PKAAKFS++VTV  S ++G+LF A+ILA++
Sbjct: 302 MNLQLWTLMIALGFNAAISVRVSNELGAGNPKAAKFSVMVTVLTSTILGVLFTAVILATK 361

Query: 280 SDFPKMFTDRTVVIEETSKLGYLLA 354
           ++FPK+FT +  V++E SKLGY LA
Sbjct: 362 NEFPKVFTGKPAVMQEASKLGYFLA 386


>ref|XP_002458553.1| hypothetical protein SORBIDRAFT_03g035610 [Sorghum bicolor]
           gi|241930528|gb|EES03673.1| hypothetical protein
           SORBIDRAFT_03g035610 [Sorghum bicolor]
          Length = 487

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 43/85 (50%), Positives = 60/85 (70%)
 Frame = +1

Query: 100 LNLQVWALTIAMDPVQIYSVRVSNELGAARPKAAKFSILVTVSASVLVGILFMAIILASR 279
           +N Q+W L +A+      SVRVSNELGA  PKAAKFS++V  + S ++G++F A+ LA+R
Sbjct: 287 MNYQLWTLMVAVGFNAAVSVRVSNELGANHPKAAKFSVVVATATSAVIGVIFTAVALAAR 346

Query: 280 SDFPKMFTDRTVVIEETSKLGYLLA 354
              P++FT   VV+  T+KLGYLLA
Sbjct: 347 KQMPRLFTGDDVVLRATAKLGYLLA 371


>gb|AFW84961.1| putative MATE efflux family protein [Zea mays]
          Length = 554

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 44/85 (51%), Positives = 59/85 (69%)
 Frame = +1

Query: 100 LNLQVWALTIAMDPVQIYSVRVSNELGAARPKAAKFSILVTVSASVLVGILFMAIILASR 279
           +N Q+W L +A+      SVRVSNELGA  PKAA+FS++V    S  VG++F A+ LA+R
Sbjct: 349 MNYQLWTLMVAVGFNAAVSVRVSNELGANHPKAARFSVVVATVTSAAVGVVFTAVALAAR 408

Query: 280 SDFPKMFTDRTVVIEETSKLGYLLA 354
              P++FT   VV+ ET+KLGYLLA
Sbjct: 409 KQMPRLFTGDDVVVRETAKLGYLLA 433


>ref|NP_001146663.1| uncharacterized protein LOC100280263 [Zea mays]
           gi|219888227|gb|ACL54488.1| unknown [Zea mays]
          Length = 490

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 44/85 (51%), Positives = 59/85 (69%)
 Frame = +1

Query: 100 LNLQVWALTIAMDPVQIYSVRVSNELGAARPKAAKFSILVTVSASVLVGILFMAIILASR 279
           +N Q+W L +A+      SVRVSNELGA  PKAA+FS++V    S  VG++F A+ LA+R
Sbjct: 285 MNYQLWTLMVAVGFNAAVSVRVSNELGANHPKAARFSVVVATVTSAAVGVVFTAVALAAR 344

Query: 280 SDFPKMFTDRTVVIEETSKLGYLLA 354
              P++FT   VV+ ET+KLGYLLA
Sbjct: 345 KQMPRLFTGDDVVVRETAKLGYLLA 369


>gb|EEC71541.1| hypothetical protein OsI_03865 [Oryza sativa Indica Group]
          Length = 477

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 43/85 (50%), Positives = 59/85 (69%)
 Frame = +1

Query: 100 LNLQVWALTIAMDPVQIYSVRVSNELGAARPKAAKFSILVTVSASVLVGILFMAIILASR 279
           +N Q+W L +A+      SVRV+NELGA  PKAAKFS++V V  S  VG++F  + L +R
Sbjct: 287 MNYQLWTLMVAVGFNAAVSVRVANELGANHPKAAKFSVIVAVVTSAAVGLVFTLVALVAR 346

Query: 280 SDFPKMFTDRTVVIEETSKLGYLLA 354
              P++FTD  V++ ET+KLGYLLA
Sbjct: 347 KQLPRLFTDDDVLVRETAKLGYLLA 371


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