BLASTX nr result

ID: Coptis23_contig00041936 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041936
         (709 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002875477.1| hypothetical protein ARALYDRAFT_484658 [Arab...    72   1e-10
ref|NP_189530.2| Ankyrin repeat family protein [Arabidopsis thal...    69   1e-09
dbj|BAB02131.1| unnamed protein product [Arabidopsis thaliana]         69   1e-09
emb|CBI22199.3| unnamed protein product [Vitis vinifera]               58   2e-06
emb|CAN60905.1| hypothetical protein VITISV_028449 [Vitis vinifera]    58   2e-06

>ref|XP_002875477.1| hypothetical protein ARALYDRAFT_484658 [Arabidopsis lyrata subsp.
            lyrata] gi|297321315|gb|EFH51736.1| hypothetical protein
            ARALYDRAFT_484658 [Arabidopsis lyrata subsp. lyrata]
          Length = 780

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 44/161 (27%), Positives = 66/161 (40%), Gaps = 8/161 (4%)
 Frame = +3

Query: 156  AQDNKRTEKGKSIVPQPNPWSLTSGNRGSSSDKQPQLQDEXXXXXXXDDNEITNQELLKV 335
            A D+K  +      PQP P   T+ +      K P L                  E L  
Sbjct: 611  AHDSKTFKAPPEPKPQPPPPLTTASSNNQRQLKHPVL------------------ETLTR 652

Query: 336  LSGGGFSLFDRSHFFYHDYRKCLEKSLCFRCKKNRILWASHPCGHLLWCTPCKTSICRQ- 512
            +       F R   FY  Y  CL++ +CF C KN +LWA+ PC H LWC+ CK  + +  
Sbjct: 653  IRNSTSVFFLREFDFYQSYETCLKEGMCFWCNKNMLLWANFPCRHKLWCSSCKQQVTQSA 712

Query: 513  ------EPKIEFCMYCAGELEKYTVKWSTDGE-HSLADDFP 614
                  E     C+ C  ++E++ +    + + H L+ D P
Sbjct: 713  LGEKSLEEDHHKCVVCDAKVERFVLSPPFESDHHRLSSDRP 753


>ref|NP_189530.2| Ankyrin repeat family protein [Arabidopsis thaliana]
            gi|332643979|gb|AEE77500.1| Ankyrin repeat family protein
            [Arabidopsis thaliana]
          Length = 772

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 45/161 (27%), Positives = 62/161 (38%), Gaps = 8/161 (4%)
 Frame = +3

Query: 156  AQDNKRTEKGKSIVPQPNPWSLTSGNRGSSSDKQPQLQDEXXXXXXXDDNEITNQELLKV 335
            A D+K  +       QP P    S N      K P L                  E L  
Sbjct: 603  AHDSKTFKASPQPKAQPPPPLTASYNNNQRQLKHPVL------------------ETLTK 644

Query: 336  LSGGGFSLFDRSHFFYHDYRKCLEKSLCFRCKKNRILWASHPCGHLLWCTPCKTSICRQ- 512
            +       F R   FY  Y  CL++ +CF C KN I WA+ PC H LWC+ CK  I +  
Sbjct: 645  IRNSTSVFFLREFDFYQSYETCLKEGMCFWCNKNMIRWANFPCRHKLWCSSCKQQITQST 704

Query: 513  ------EPKIEFCMYCAGELEKYTVKWSTD-GEHSLADDFP 614
                  E     C+ C  ++E++ +    + G H +  D P
Sbjct: 705  SGEKILEEDHHKCVVCDAKVERFVLSPPFESGHHRILSDRP 745


>dbj|BAB02131.1| unnamed protein product [Arabidopsis thaliana]
          Length = 738

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 45/161 (27%), Positives = 62/161 (38%), Gaps = 8/161 (4%)
 Frame = +3

Query: 156 AQDNKRTEKGKSIVPQPNPWSLTSGNRGSSSDKQPQLQDEXXXXXXXDDNEITNQELLKV 335
           A D+K  +       QP P    S N      K P L                  E L  
Sbjct: 569 AHDSKTFKASPQPKAQPPPPLTASYNNNQRQLKHPVL------------------ETLTK 610

Query: 336 LSGGGFSLFDRSHFFYHDYRKCLEKSLCFRCKKNRILWASHPCGHLLWCTPCKTSICRQ- 512
           +       F R   FY  Y  CL++ +CF C KN I WA+ PC H LWC+ CK  I +  
Sbjct: 611 IRNSTSVFFLREFDFYQSYETCLKEGMCFWCNKNMIRWANFPCRHKLWCSSCKQQITQST 670

Query: 513 ------EPKIEFCMYCAGELEKYTVKWSTD-GEHSLADDFP 614
                 E     C+ C  ++E++ +    + G H +  D P
Sbjct: 671 SGEKILEEDHHKCVVCDAKVERFVLSPPFESGHHRILSDRP 711


>emb|CBI22199.3| unnamed protein product [Vitis vinifera]
          Length = 849

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
 Frame = +3

Query: 360 FDRSHFFYHDYRKCLEKSLCFRCKKNRILWASHPCGHLLWCTPCKTSICRQEPKIEF-CM 536
           F R   FY +Y+  + +  CF C ++ + WA+ PC HLLWC  CK    +    +E  C+
Sbjct: 700 FLREFDFYENYKSSVAQGKCFACNRSEMFWANFPCKHLLWCGNCKIHAIQAASILEHKCV 759

Query: 537 YCAGELEKYTVKWSTDGEHSLAD----DFPTWD 623
            C  +++       T+    + D    DFP +D
Sbjct: 760 VCDAQVQNIGPLPWTEKYQQICDVPNNDFPPFD 792


>emb|CAN60905.1| hypothetical protein VITISV_028449 [Vitis vinifera]
          Length = 1609

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
 Frame = +3

Query: 360  FDRSHFFYHDYRKCLEKSLCFRCKKNRILWASHPCGHLLWCTPCKTSICRQEPKIEF-CM 536
            F R   FY +Y+  + +  CF C ++ + WA+ PC HLLWC  CK    +    +E  C+
Sbjct: 1495 FLREFDFYENYKSSVAQGKCFACNRSEMFWANFPCKHLLWCGNCKIHAIQAASILEHKCV 1554

Query: 537  YCAGELEKYTVKWSTDGEHSLAD----DFPTWD 623
             C  +++       T+    + D    DFP +D
Sbjct: 1555 VCDAQVQNIGPLPWTEKYQQICDVPNNDFPPFD 1587


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