BLASTX nr result

ID: Coptis23_contig00041926 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041926
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308807.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
ref|XP_002522905.1| hypothetical protein RCOM_0864030 [Ricinus c...    75   7e-12
emb|CBI38440.3| unnamed protein product [Vitis vinifera]               74   9e-12
ref|XP_002269165.1| PREDICTED: uncharacterized protein LOC100256...    74   9e-12
emb|CAN83274.1| hypothetical protein VITISV_026334 [Vitis vinifera]    74   9e-12

>ref|XP_002308807.1| predicted protein [Populus trichocarpa] gi|222854783|gb|EEE92330.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 48/102 (47%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
 Frame = -1

Query: 301 EATISSEFSLGDPTGPESSDDMFLKDFNPCLTPYSTKTRSKEFDESRGYNSPDEAGLFGS 122
           E   S EFS  D   P S DD FLKDFNPCLTPY  K +SKEF E+ GY S  +  L GS
Sbjct: 276 ETANSLEFSSCDGATPGSPDDTFLKDFNPCLTPYCAKKKSKEF-EAMGYESSLDGSLSGS 334

Query: 121 SSNVWS--TNYSQAGKTSKSSEYCQIAIKGSTTARTFRWSNE 2
           ++ + +  +  S+  K SKSS+  Q +  GST  R  R S+E
Sbjct: 335 NTQMSNELSFSSRVRKLSKSSDCYQNSNTGSTMTRATRRSDE 376


>ref|XP_002522905.1| hypothetical protein RCOM_0864030 [Ricinus communis]
           gi|223537890|gb|EEF39505.1| hypothetical protein
           RCOM_0864030 [Ricinus communis]
          Length = 391

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 53/105 (50%), Positives = 61/105 (58%), Gaps = 5/105 (4%)
 Frame = -1

Query: 301 EATISSEFSLGDPTGPESSDDMFLKDFNPCLTPYSTKTRSKEFDESRGYNSPDEAGLFGS 122
           EAT S EFS  D   P S DDMF KDFNPCLTPY  KT+SKEF E+ GY+SP E  L  S
Sbjct: 276 EATNSLEFSSCDAASPGSPDDMFPKDFNPCLTPYYAKTKSKEF-EAIGYDSPLEESL--S 332

Query: 121 SSNVWSTN----YSQAGKTSKSSEYCQIAIK-GSTTARTFRWSNE 2
             N   +N     S+  K SKSS+  +I    GST  R    S+E
Sbjct: 333 EENRQMSNELRFNSRIRKMSKSSDCYKINNNAGSTKVRATHRSDE 377


>emb|CBI38440.3| unnamed protein product [Vitis vinifera]
          Length = 400

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 46/100 (46%), Positives = 57/100 (57%)
 Frame = -1

Query: 301 EATISSEFSLGDPTGPESSDDMFLKDFNPCLTPYSTKTRSKEFDESRGYNSPDEAGLFGS 122
           EAT S +FS  DP  P S DDMFLKD NPCLTPY  KT+SKEF+    Y+SP    L+ +
Sbjct: 293 EATNSLDFSSEDPATPGSPDDMFLKDLNPCLTPYYAKTKSKEFEVD--YDSPPHERLYEN 350

Query: 121 SSNVWSTNYSQAGKTSKSSEYCQIAIKGSTTARTFRWSNE 2
           +        S+  K S+SSE  Q +   S   R  R S+E
Sbjct: 351 NLQF----NSRVRKMSRSSECSQNSNVASIAVRATRRSDE 386


>ref|XP_002269165.1| PREDICTED: uncharacterized protein LOC100256556 [Vitis vinifera]
          Length = 404

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 46/100 (46%), Positives = 57/100 (57%)
 Frame = -1

Query: 301 EATISSEFSLGDPTGPESSDDMFLKDFNPCLTPYSTKTRSKEFDESRGYNSPDEAGLFGS 122
           EAT S +FS  DP  P S DDMFLKD NPCLTPY  KT+SKEF+    Y+SP    L+ +
Sbjct: 297 EATNSLDFSSEDPATPGSPDDMFLKDLNPCLTPYYAKTKSKEFEVD--YDSPPHERLYEN 354

Query: 121 SSNVWSTNYSQAGKTSKSSEYCQIAIKGSTTARTFRWSNE 2
           +        S+  K S+SSE  Q +   S   R  R S+E
Sbjct: 355 NLQF----NSRVRKMSRSSECSQNSNVASIAVRATRRSDE 390


>emb|CAN83274.1| hypothetical protein VITISV_026334 [Vitis vinifera]
          Length = 404

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 46/100 (46%), Positives = 57/100 (57%)
 Frame = -1

Query: 301 EATISSEFSLGDPTGPESSDDMFLKDFNPCLTPYSTKTRSKEFDESRGYNSPDEAGLFGS 122
           EAT S +FS  DP  P S DDMFLKD NPCLTPY  KT+SKEF+    Y+SP    L+ +
Sbjct: 297 EATNSLDFSSEDPATPGSPDDMFLKDLNPCLTPYYAKTKSKEFEVD--YDSPPHERLYEN 354

Query: 121 SSNVWSTNYSQAGKTSKSSEYCQIAIKGSTTARTFRWSNE 2
           +        S+  K S+SSE  Q +   S   R  R S+E
Sbjct: 355 NLQF----NSRVRKMSRSSECSQNSNVASIAVRVARRSDE 390


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