BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041923
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containi...   124   8e-27
ref|XP_003610755.1| Pentatricopeptide repeat-containing protein ...   110   1e-22
ref|XP_004162510.1| PREDICTED: pentatricopeptide repeat-containi...   110   2e-22
ref|XP_004138834.1| PREDICTED: pentatricopeptide repeat-containi...   110   2e-22
gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indi...   106   2e-21

>ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
           mitochondrial [Vitis vinifera]
          Length = 535

 Score =  124 bits (311), Expect = 8e-27
 Identities = 61/102 (59%), Positives = 77/102 (75%)
 Frame = +1

Query: 52  DKEVDEISAILKTRHTSPEEVVKALDGWSFVVSESLVEKVMKRFSHDWISAFGLFKWYQK 231
           D ++D+IS +LK RH+S + VV+AL G    VSESLVE+V+KRFS+DWI AFG FKW + 
Sbjct: 86  DSDIDKISELLKFRHSSADAVVQALGGCGVSVSESLVEQVLKRFSNDWIPAFGFFKWAKA 145

Query: 232 QTGYKSSPGLYDLIVDILGKAKMFDMMWDLVVEMVFLGGLVS 357
           QTGY+ S   Y+ +VDILGK K FD+MW+LV EM  LGG VS
Sbjct: 146 QTGYRHSMNSYNSMVDILGKLKKFDLMWELVEEMDRLGGYVS 187


>ref|XP_003610755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355512090|gb|AES93713.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 596

 Score =  110 bits (275), Expect = 1e-22
 Identities = 56/101 (55%), Positives = 75/101 (74%), Gaps = 1/101 (0%)
 Frame = +1

Query: 55  KEVDEISAILKT-RHTSPEEVVKALDGWSFVVSESLVEKVMKRFSHDWISAFGLFKWYQK 231
           ++V++IS  LK  RH+S + VV+ALDG  F VS SLV +V+KRF +DW++A+G F W +K
Sbjct: 144 EDVEKISTFLKEQRHSSHDHVVQALDGSGFRVSNSLVMQVLKRFGNDWVAAYGFFIWAKK 203

Query: 232 QTGYKSSPGLYDLIVDILGKAKMFDMMWDLVVEMVFLGGLV 354
           QT Y  SP +Y+L+VDILGKAK FD+MW LV EM  + G V
Sbjct: 204 QTPYVHSPEVYNLMVDILGKAKEFDLMWKLVKEMKRIEGYV 244


>ref|XP_004162510.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
           mitochondrial-like [Cucumis sativus]
          Length = 614

 Score =  110 bits (274), Expect = 2e-22
 Identities = 53/102 (51%), Positives = 75/102 (73%)
 Frame = +1

Query: 52  DKEVDEISAILKTRHTSPEEVVKALDGWSFVVSESLVEKVMKRFSHDWISAFGLFKWYQK 231
           + EVD+IS +L+ R+ SPE V +AL+G ++ VS +LV +++KRF +DWI A+G+FKW + 
Sbjct: 163 NNEVDKISTMLENRYPSPENVAEALNGKAYRVSNTLVAQLLKRFHNDWIQAYGIFKWAKD 222

Query: 232 QTGYKSSPGLYDLIVDILGKAKMFDMMWDLVVEMVFLGGLVS 357
           Q  Y+ SP  Y+ +VDILGKAK F +MW+LV EM  L G VS
Sbjct: 223 QIPYRHSPESYNSMVDILGKAKNFRLMWELVDEMNHLAGSVS 264


>ref|XP_004138834.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
           mitochondrial-like [Cucumis sativus]
          Length = 591

 Score =  110 bits (274), Expect = 2e-22
 Identities = 53/102 (51%), Positives = 75/102 (73%)
 Frame = +1

Query: 52  DKEVDEISAILKTRHTSPEEVVKALDGWSFVVSESLVEKVMKRFSHDWISAFGLFKWYQK 231
           + EVD+IS +L+ R+ SPE V +AL+G ++ VS +LV +++KRF +DWI A+G+FKW + 
Sbjct: 140 NNEVDKISTMLENRYPSPENVAEALNGKAYRVSNTLVAQLLKRFHNDWIQAYGIFKWAKD 199

Query: 232 QTGYKSSPGLYDLIVDILGKAKMFDMMWDLVVEMVFLGGLVS 357
           Q  Y+ SP  Y+ +VDILGKAK F +MW+LV EM  L G VS
Sbjct: 200 QIPYRHSPESYNSMVDILGKAKNFRLMWELVDEMNHLAGSVS 241


>gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
          Length = 1874

 Score =  106 bits (264), Expect = 2e-21
 Identities = 50/102 (49%), Positives = 70/102 (68%)
 Frame = +1

Query: 52   DKEVDEISAILKTRHTSPEEVVKALDGWSFVVSESLVEKVMKRFSHDWISAFGLFKWYQK 231
            + ++DE+S IL  R  SPE ++ A+D  S  V+  LV+K++ RFS+DW++AFG F W   
Sbjct: 1419 EADIDEVSRILSARFASPEAIMIAMDCCSVRVTGCLVDKILTRFSNDWVAAFGFFMWVGT 1478

Query: 232  QTGYKSSPGLYDLIVDILGKAKMFDMMWDLVVEMVFLGGLVS 357
            Q GY      YDL+VDILGK K FD+MW L+ +MV +GGL+S
Sbjct: 1479 QGGYCHCADSYDLMVDILGKFKQFDLMWGLINQMVEVGGLMS 1520