BLASTX nr result

ID: Coptis23_contig00041907 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041907
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004222360.1| hypothetical protein BevumaM_p127 [Beta vulg...   152   3e-35
ref|YP_173402.1| hypothetical protein NitaMp056 [Nicotiana tabac...   152   4e-35
ref|XP_004153710.1| PREDICTED: LOW QUALITY PROTEIN: NADH-ubiquin...   150   1e-34
ref|XP_004153322.1| PREDICTED: NADH-ubiquinone oxidoreductase ch...   150   1e-34
ref|XP_003588292.1| NADH-ubiquinone oxidoreductase chain [Medica...   150   1e-34

>ref|YP_004222360.1| hypothetical protein BevumaM_p127 [Beta vulgaris subsp. maritima]
           gi|346683233|ref|YP_004842165.1| hypothetical protein
           BemaM_p121 [Beta macrocarpa]
           gi|317905592|emb|CBX33215.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439875|emb|CBX33310.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320148029|emb|CBJ20693.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500151|emb|CBX24970.1|
           hypothetical protein [Beta macrocarpa]
           gi|384977923|emb|CBL54147.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 133

 Score =  152 bits (384), Expect = 3e-35
 Identities = 77/79 (97%), Positives = 77/79 (97%)
 Frame = +3

Query: 3   EIVMAQKQIWFGIPLFPVLVMFFISCLAETNRAPFDLPEAEAESVAGYNVEYARDAILNS 182
           EIVMAQKQIW GIPLFPVLVMFFISCLAETNRAPFDLPEAEAE VAGYNVEYARDAILNS
Sbjct: 43  EIVMAQKQIWSGIPLFPVLVMFFISCLAETNRAPFDLPEAEAELVAGYNVEYARDAILNS 102

Query: 183 SLLAEANVPGSRGLILTET 239
           SLLAEANVPGSRGLILTET
Sbjct: 103 SLLAEANVPGSRGLILTET 121


>ref|YP_173402.1| hypothetical protein NitaMp056 [Nicotiana tabacum]
           gi|56806565|dbj|BAD83466.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 142

 Score =  152 bits (383), Expect = 4e-35
 Identities = 78/80 (97%), Positives = 78/80 (97%)
 Frame = +3

Query: 3   EIVMAQKQIWFGIPLFPVLVMFFISCLAETNRAPFDLPEAEAESVAGYNVEYARDAILNS 182
           EIVMAQKQIW GIPLFPVLVMFFIS LAETNRAPFDLPEAEAESVAGYNVEYARDAILNS
Sbjct: 43  EIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILNS 102

Query: 183 SLLAEANVPGSRGLILTETR 242
           SLLAEANVPGSRGLILTETR
Sbjct: 103 SLLAEANVPGSRGLILTETR 122


>ref|XP_004153710.1| PREDICTED: LOW QUALITY PROTEIN: NADH-ubiquinone oxidoreductase
           chain 1-like [Cucumis sativus]
          Length = 166

 Score =  150 bits (378), Expect = 1e-34
 Identities = 77/80 (96%), Positives = 77/80 (96%)
 Frame = +3

Query: 3   EIVMAQKQIWFGIPLFPVLVMFFISCLAETNRAPFDLPEAEAESVAGYNVEYARDAILNS 182
           EIVMAQKQIW GIPLFPVLVMFFIS LAETNRAPFDLPEAEAESVAGYNVEYARDAILNS
Sbjct: 44  EIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILNS 103

Query: 183 SLLAEANVPGSRGLILTETR 242
            LLAEANVPGSRGLILTETR
Sbjct: 104 PLLAEANVPGSRGLILTETR 123


>ref|XP_004153322.1| PREDICTED: NADH-ubiquinone oxidoreductase chain 1-like, partial
           [Cucumis sativus] gi|449472154|ref|XP_004153510.1|
           PREDICTED: NADH-ubiquinone oxidoreductase chain 1-like,
           partial [Cucumis sativus]
           gi|449473509|ref|XP_004153902.1| PREDICTED:
           NADH-ubiquinone oxidoreductase chain 1-like, partial
           [Cucumis sativus] gi|449529808|ref|XP_004171890.1|
           PREDICTED: NADH-ubiquinone oxidoreductase chain 1-like,
           partial [Cucumis sativus]
          Length = 135

 Score =  150 bits (378), Expect = 1e-34
 Identities = 77/80 (96%), Positives = 77/80 (96%)
 Frame = +3

Query: 3   EIVMAQKQIWFGIPLFPVLVMFFISCLAETNRAPFDLPEAEAESVAGYNVEYARDAILNS 182
           EIVMAQKQIW GIPLFPVLVMFFIS LAETNRAPFDLPEAEAESVAGYNVEYARDAILNS
Sbjct: 44  EIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILNS 103

Query: 183 SLLAEANVPGSRGLILTETR 242
            LLAEANVPGSRGLILTETR
Sbjct: 104 PLLAEANVPGSRGLILTETR 123


>ref|XP_003588292.1| NADH-ubiquinone oxidoreductase chain [Medicago truncatula]
           gi|355477340|gb|AES58543.1| NADH-ubiquinone
           oxidoreductase chain [Medicago truncatula]
          Length = 335

 Score =  150 bits (378), Expect = 1e-34
 Identities = 77/80 (96%), Positives = 77/80 (96%)
 Frame = +3

Query: 3   EIVMAQKQIWFGIPLFPVLVMFFISCLAETNRAPFDLPEAEAESVAGYNVEYARDAILNS 182
           EIVMAQKQIW GIPLFPVLVMFFIS LAETNRAPFDLPEAEAESVAGYNVEYARDAILNS
Sbjct: 250 EIVMAQKQIWSGIPLFPVLVMFFISRLAETNRAPFDLPEAEAESVAGYNVEYARDAILNS 309

Query: 183 SLLAEANVPGSRGLILTETR 242
            LLAEANVPGSRGLILTETR
Sbjct: 310 PLLAEANVPGSRGLILTETR 329


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