BLASTX nr result

ID: Coptis23_contig00041879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041879
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001043754.1| Os01g0656200 [Oryza sativa Japonica Group] g...   164   5e-39
ref|XP_002441544.1| hypothetical protein SORBIDRAFT_09g029080 [S...   164   7e-39
ref|NP_001167952.1| uncharacterized protein LOC100381666 [Zea ma...   162   2e-38
ref|XP_002513570.1| protein phosphatase 2c, putative [Ricinus co...   160   8e-38
ref|XP_003569481.1| PREDICTED: probable protein phosphatase 2C 8...   160   1e-37

>ref|NP_001043754.1| Os01g0656200 [Oryza sativa Japonica Group]
           gi|75286811|sp|Q5SN75.1|P2C08_ORYSJ RecName:
           Full=Probable protein phosphatase 2C 8; Short=OsPP2C08
           gi|55773943|dbj|BAD72331.1| protein phosphatase 2C-like
           [Oryza sativa Japonica Group]
           gi|113533285|dbj|BAF05668.1| Os01g0656200 [Oryza sativa
           Japonica Group] gi|215686965|dbj|BAG90835.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 403

 Score =  164 bits (416), Expect = 5e-39
 Identities = 78/96 (81%), Positives = 89/96 (92%)
 Frame = -3

Query: 288 STALVALVSTNKLVVANCGDSRGVLSRGGVAVPLSHDHKPDRPDEMERVEAAGGRVINWN 109
           STA+VA+V   ++VVANCGDSR VLSRGGVAVPLS DHKPDRPDEMERVEAAGGRVINWN
Sbjct: 220 STAVVAVVGPRRIVVANCGDSRAVLSRGGVAVPLSSDHKPDRPDEMERVEAAGGRVINWN 279

Query: 108 GYRVLGVLATSRSIGDQYLKPYVISVPEVSIIERTE 1
           GYR+LGVLATSRSIGD YLKPYVI+ PEV++++RT+
Sbjct: 280 GYRILGVLATSRSIGDYYLKPYVIAEPEVTVMDRTD 315


>ref|XP_002441544.1| hypothetical protein SORBIDRAFT_09g029080 [Sorghum bicolor]
           gi|241946829|gb|EES19974.1| hypothetical protein
           SORBIDRAFT_09g029080 [Sorghum bicolor]
          Length = 399

 Score =  164 bits (415), Expect = 7e-39
 Identities = 79/96 (82%), Positives = 88/96 (91%)
 Frame = -3

Query: 288 STALVALVSTNKLVVANCGDSRGVLSRGGVAVPLSHDHKPDRPDEMERVEAAGGRVINWN 109
           STA+VA+V   ++VVANCGDSR VLSRGGVAVPLS DHKPDRPDEM+RVEAAGGRVINWN
Sbjct: 221 STAVVAVVGQRRIVVANCGDSRAVLSRGGVAVPLSTDHKPDRPDEMQRVEAAGGRVINWN 280

Query: 108 GYRVLGVLATSRSIGDQYLKPYVISVPEVSIIERTE 1
           GYRVLGVLATSRSIGD YLKPYV + PEV+++ERTE
Sbjct: 281 GYRVLGVLATSRSIGDYYLKPYVSAEPEVTVVERTE 316


>ref|NP_001167952.1| uncharacterized protein LOC100381666 [Zea mays]
           gi|223945075|gb|ACN26621.1| unknown [Zea mays]
           gi|413948544|gb|AFW81193.1| putative protein phosphatase
           2C family protein [Zea mays]
          Length = 375

 Score =  162 bits (411), Expect = 2e-38
 Identities = 77/96 (80%), Positives = 87/96 (90%)
 Frame = -3

Query: 288 STALVALVSTNKLVVANCGDSRGVLSRGGVAVPLSHDHKPDRPDEMERVEAAGGRVINWN 109
           STA+VA+V   ++VV NCGDSR VLSRGGVAVPLS DHKPDRPDEM+RVEAAGGRV+NWN
Sbjct: 196 STAVVAVVGRRRIVVGNCGDSRAVLSRGGVAVPLSSDHKPDRPDEMQRVEAAGGRVVNWN 255

Query: 108 GYRVLGVLATSRSIGDQYLKPYVISVPEVSIIERTE 1
           GYRVLGVLATSRSIGD YLKPYV + PEV+++ERTE
Sbjct: 256 GYRVLGVLATSRSIGDYYLKPYVSAEPEVTVVERTE 291


>ref|XP_002513570.1| protein phosphatase 2c, putative [Ricinus communis]
           gi|223547478|gb|EEF48973.1| protein phosphatase 2c,
           putative [Ricinus communis]
          Length = 352

 Score =  160 bits (406), Expect = 8e-38
 Identities = 78/96 (81%), Positives = 89/96 (92%)
 Frame = -3

Query: 288 STALVALVSTNKLVVANCGDSRGVLSRGGVAVPLSHDHKPDRPDEMERVEAAGGRVINWN 109
           STA+VA+V  ++LVVANCGDSR VL RGGVAVPLS DHKPDRPDE+ERVEAAGGR+INWN
Sbjct: 183 STAVVAVVGRDELVVANCGDSRAVLCRGGVAVPLSVDHKPDRPDELERVEAAGGRIINWN 242

Query: 108 GYRVLGVLATSRSIGDQYLKPYVISVPEVSIIERTE 1
           G+RVLGVLATSRSIGDQYLKP+VIS PEV++ +RTE
Sbjct: 243 GHRVLGVLATSRSIGDQYLKPFVISKPEVTVNKRTE 278


>ref|XP_003569481.1| PREDICTED: probable protein phosphatase 2C 8-like [Brachypodium
           distachyon]
          Length = 392

 Score =  160 bits (405), Expect = 1e-37
 Identities = 76/96 (79%), Positives = 87/96 (90%)
 Frame = -3

Query: 288 STALVALVSTNKLVVANCGDSRGVLSRGGVAVPLSHDHKPDRPDEMERVEAAGGRVINWN 109
           STA+VA+V   ++VVANCGDSR VLSR GV VPLS DHKPDRPDEMERVEAAGGRVINWN
Sbjct: 208 STAVVAVVGPRRIVVANCGDSRAVLSRAGVPVPLSDDHKPDRPDEMERVEAAGGRVINWN 267

Query: 108 GYRVLGVLATSRSIGDQYLKPYVISVPEVSIIERTE 1
           GYR+LGVLATSRSIGD YLKPYVI+ PEV++++RT+
Sbjct: 268 GYRILGVLATSRSIGDYYLKPYVIAEPEVTVMDRTD 303


Top