BLASTX nr result

ID: Coptis23_contig00041872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041872
         (272 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004170679.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor...   143   1e-32
ref|XP_004142341.1| PREDICTED: ABC transporter B family member 1...   143   1e-32
ref|XP_002517423.1| multidrug resistance protein 1, 2, putative ...   143   2e-32
ref|XP_002877101.1| abc transporter family protein [Arabidopsis ...   141   6e-32
dbj|BAF00235.1| P-glycoprotein [Arabidopsis thaliana]                 141   6e-32

>ref|XP_004170679.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter B family member
           15-like [Cucumis sativus]
          Length = 946

 Score =  143 bits (361), Expect = 1e-32
 Identities = 67/90 (74%), Positives = 81/90 (90%)
 Frame = +2

Query: 2   LPEWKQAILGCTGAMLFGAVQPIYAFMMGSMISVYFLTDHDEIRSKTRIYALFFLCLAVV 181
           LPEWKQA++GC+GA++FGAVQP+YAF MGSMISVYFL  H+EI++KTR YAL F+ LA++
Sbjct: 373 LPEWKQALMGCSGAVVFGAVQPLYAFAMGSMISVYFLKSHEEIKAKTRTYALCFVGLALL 432

Query: 182 SLLINIIQHYNFAVMGECLTKRIRERMLSK 271
           SLL+NIIQHYNFA MGE LTKR+RE MLSK
Sbjct: 433 SLLVNIIQHYNFAYMGEYLTKRVREMMLSK 462


>ref|XP_004142341.1| PREDICTED: ABC transporter B family member 15-like [Cucumis
           sativus]
          Length = 1251

 Score =  143 bits (361), Expect = 1e-32
 Identities = 67/90 (74%), Positives = 81/90 (90%)
 Frame = +2

Query: 2   LPEWKQAILGCTGAMLFGAVQPIYAFMMGSMISVYFLTDHDEIRSKTRIYALFFLCLAVV 181
           LPEWKQA++GC+GA++FGAVQP+YAF MGSMISVYFL  H+EI++KTR YAL F+ LA++
Sbjct: 678 LPEWKQALMGCSGAVVFGAVQPLYAFAMGSMISVYFLKSHEEIKAKTRTYALCFVGLALL 737

Query: 182 SLLINIIQHYNFAVMGECLTKRIRERMLSK 271
           SLL+NIIQHYNFA MGE LTKR+RE MLSK
Sbjct: 738 SLLVNIIQHYNFAYMGEYLTKRVREMMLSK 767


>ref|XP_002517423.1| multidrug resistance protein 1, 2, putative [Ricinus communis]
           gi|223543434|gb|EEF44965.1| multidrug resistance protein
           1, 2, putative [Ricinus communis]
          Length = 672

 Score =  143 bits (360), Expect = 2e-32
 Identities = 68/90 (75%), Positives = 78/90 (86%)
 Frame = +2

Query: 2   LPEWKQAILGCTGAMLFGAVQPIYAFMMGSMISVYFLTDHDEIRSKTRIYALFFLCLAVV 181
           LPEWKQA  GC GA+LFG VQP+YAF MGSMIS+YFLTDH+EI+ + RIY+L FL L+V 
Sbjct: 106 LPEWKQASFGCLGAILFGGVQPVYAFAMGSMISIYFLTDHNEIKEQMRIYSLCFLGLSVF 165

Query: 182 SLLINIIQHYNFAVMGECLTKRIRERMLSK 271
           SL+INI+QHYNFA MGE LTKRIRERMLSK
Sbjct: 166 SLIINIVQHYNFAYMGEYLTKRIRERMLSK 195


>ref|XP_002877101.1| abc transporter family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297322939|gb|EFH53360.1| abc transporter family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 1239

 Score =  141 bits (355), Expect = 6e-32
 Identities = 68/90 (75%), Positives = 76/90 (84%)
 Frame = +2

Query: 2   LPEWKQAILGCTGAMLFGAVQPIYAFMMGSMISVYFLTDHDEIRSKTRIYALFFLCLAVV 181
           LPEWKQA+ GC  A LFGA+QP YA+ +GSM+SVYFLT HDEI+ KTRIYAL F+ LAV+
Sbjct: 666 LPEWKQALYGCISATLFGAIQPAYAYSLGSMVSVYFLTSHDEIKEKTRIYALSFVGLAVL 725

Query: 182 SLLINIIQHYNFAVMGECLTKRIRERMLSK 271
           S LINI QHYNFA MGE LTKRIRERMLSK
Sbjct: 726 SFLINISQHYNFAYMGEYLTKRIRERMLSK 755


>dbj|BAF00235.1| P-glycoprotein [Arabidopsis thaliana]
          Length = 908

 Score =  141 bits (355), Expect = 6e-32
 Identities = 68/90 (75%), Positives = 76/90 (84%)
 Frame = +2

Query: 2   LPEWKQAILGCTGAMLFGAVQPIYAFMMGSMISVYFLTDHDEIRSKTRIYALFFLCLAVV 181
           LPEWKQA+ GC  A LFGA+QP YA+ +GSM+SVYFLT HDEI+ KTRIYAL F+ LAV+
Sbjct: 334 LPEWKQALYGCISATLFGAIQPAYAYSLGSMVSVYFLTSHDEIKEKTRIYALSFVGLAVL 393

Query: 182 SLLINIIQHYNFAVMGECLTKRIRERMLSK 271
           S LINI QHYNFA MGE LTKRIRERMLSK
Sbjct: 394 SFLINISQHYNFAYMGEYLTKRIRERMLSK 423


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