BLASTX nr result
ID: Coptis23_contig00041872
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00041872 (272 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004170679.1| PREDICTED: LOW QUALITY PROTEIN: ABC transpor... 143 1e-32 ref|XP_004142341.1| PREDICTED: ABC transporter B family member 1... 143 1e-32 ref|XP_002517423.1| multidrug resistance protein 1, 2, putative ... 143 2e-32 ref|XP_002877101.1| abc transporter family protein [Arabidopsis ... 141 6e-32 dbj|BAF00235.1| P-glycoprotein [Arabidopsis thaliana] 141 6e-32 >ref|XP_004170679.1| PREDICTED: LOW QUALITY PROTEIN: ABC transporter B family member 15-like [Cucumis sativus] Length = 946 Score = 143 bits (361), Expect = 1e-32 Identities = 67/90 (74%), Positives = 81/90 (90%) Frame = +2 Query: 2 LPEWKQAILGCTGAMLFGAVQPIYAFMMGSMISVYFLTDHDEIRSKTRIYALFFLCLAVV 181 LPEWKQA++GC+GA++FGAVQP+YAF MGSMISVYFL H+EI++KTR YAL F+ LA++ Sbjct: 373 LPEWKQALMGCSGAVVFGAVQPLYAFAMGSMISVYFLKSHEEIKAKTRTYALCFVGLALL 432 Query: 182 SLLINIIQHYNFAVMGECLTKRIRERMLSK 271 SLL+NIIQHYNFA MGE LTKR+RE MLSK Sbjct: 433 SLLVNIIQHYNFAYMGEYLTKRVREMMLSK 462 >ref|XP_004142341.1| PREDICTED: ABC transporter B family member 15-like [Cucumis sativus] Length = 1251 Score = 143 bits (361), Expect = 1e-32 Identities = 67/90 (74%), Positives = 81/90 (90%) Frame = +2 Query: 2 LPEWKQAILGCTGAMLFGAVQPIYAFMMGSMISVYFLTDHDEIRSKTRIYALFFLCLAVV 181 LPEWKQA++GC+GA++FGAVQP+YAF MGSMISVYFL H+EI++KTR YAL F+ LA++ Sbjct: 678 LPEWKQALMGCSGAVVFGAVQPLYAFAMGSMISVYFLKSHEEIKAKTRTYALCFVGLALL 737 Query: 182 SLLINIIQHYNFAVMGECLTKRIRERMLSK 271 SLL+NIIQHYNFA MGE LTKR+RE MLSK Sbjct: 738 SLLVNIIQHYNFAYMGEYLTKRVREMMLSK 767 >ref|XP_002517423.1| multidrug resistance protein 1, 2, putative [Ricinus communis] gi|223543434|gb|EEF44965.1| multidrug resistance protein 1, 2, putative [Ricinus communis] Length = 672 Score = 143 bits (360), Expect = 2e-32 Identities = 68/90 (75%), Positives = 78/90 (86%) Frame = +2 Query: 2 LPEWKQAILGCTGAMLFGAVQPIYAFMMGSMISVYFLTDHDEIRSKTRIYALFFLCLAVV 181 LPEWKQA GC GA+LFG VQP+YAF MGSMIS+YFLTDH+EI+ + RIY+L FL L+V Sbjct: 106 LPEWKQASFGCLGAILFGGVQPVYAFAMGSMISIYFLTDHNEIKEQMRIYSLCFLGLSVF 165 Query: 182 SLLINIIQHYNFAVMGECLTKRIRERMLSK 271 SL+INI+QHYNFA MGE LTKRIRERMLSK Sbjct: 166 SLIINIVQHYNFAYMGEYLTKRIRERMLSK 195 >ref|XP_002877101.1| abc transporter family protein [Arabidopsis lyrata subsp. lyrata] gi|297322939|gb|EFH53360.1| abc transporter family protein [Arabidopsis lyrata subsp. lyrata] Length = 1239 Score = 141 bits (355), Expect = 6e-32 Identities = 68/90 (75%), Positives = 76/90 (84%) Frame = +2 Query: 2 LPEWKQAILGCTGAMLFGAVQPIYAFMMGSMISVYFLTDHDEIRSKTRIYALFFLCLAVV 181 LPEWKQA+ GC A LFGA+QP YA+ +GSM+SVYFLT HDEI+ KTRIYAL F+ LAV+ Sbjct: 666 LPEWKQALYGCISATLFGAIQPAYAYSLGSMVSVYFLTSHDEIKEKTRIYALSFVGLAVL 725 Query: 182 SLLINIIQHYNFAVMGECLTKRIRERMLSK 271 S LINI QHYNFA MGE LTKRIRERMLSK Sbjct: 726 SFLINISQHYNFAYMGEYLTKRIRERMLSK 755 >dbj|BAF00235.1| P-glycoprotein [Arabidopsis thaliana] Length = 908 Score = 141 bits (355), Expect = 6e-32 Identities = 68/90 (75%), Positives = 76/90 (84%) Frame = +2 Query: 2 LPEWKQAILGCTGAMLFGAVQPIYAFMMGSMISVYFLTDHDEIRSKTRIYALFFLCLAVV 181 LPEWKQA+ GC A LFGA+QP YA+ +GSM+SVYFLT HDEI+ KTRIYAL F+ LAV+ Sbjct: 334 LPEWKQALYGCISATLFGAIQPAYAYSLGSMVSVYFLTSHDEIKEKTRIYALSFVGLAVL 393 Query: 182 SLLINIIQHYNFAVMGECLTKRIRERMLSK 271 S LINI QHYNFA MGE LTKRIRERMLSK Sbjct: 394 SFLINISQHYNFAYMGEYLTKRIRERMLSK 423