BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041865
         (246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebenn...    55   6e-06

>gb|ABW81176.1| non-LTR reverse transcriptase [Arabidopsis cebennensis]
          Length = 464

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 23/41 (56%), Positives = 31/41 (75%)
 Frame = +3

Query: 117 QKSGQNWVKDYARNTRFFHISTLYRRRKNKIEKLKNDEGTW 239
           QKS + W+    RNT++FH ST+ RRR+N+IE LK+DEG W
Sbjct: 311 QKSREKWIALGDRNTKYFHTSTIIRRRRNQIEMLKDDEGKW 351