BLASTX nr result

ID: Coptis23_contig00041855 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041855
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526571.1| protein with unknown function [Ricinus commu...    81   8e-14
ref|XP_002321307.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
ref|XP_003541366.1| PREDICTED: uncharacterized protein LOC100776...    70   2e-10
ref|XP_002520172.1| protein with unknown function [Ricinus commu...    57   2e-06
ref|XP_002323355.1| predicted protein [Populus trichocarpa] gi|2...    55   5e-06

>ref|XP_002526571.1| protein with unknown function [Ricinus communis]
           gi|223534132|gb|EEF35849.1| protein with unknown
           function [Ricinus communis]
          Length = 804

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 47/101 (46%), Positives = 63/101 (62%)
 Frame = -3

Query: 326 KLVTLLQMYQATMKEISPLVILQTENLILDGLLQLFKEYIYSLERAISSKADVSDRIGSR 147
           K VTLLQ   A  K+++PL  LQ E  IL GL  LF EYI  LE AI+   ++S++ G R
Sbjct: 441 KFVTLLQ---AISKDVTPLAALQMEGSILAGLSDLFMEYITILEEAITCDVNMSEKSGFR 497

Query: 146 IVLAETHSQQLSVLANSSALVQIVSNIARNIFKGFKVSDGQ 24
           ++LAE+  QQ+S+LAN S L    SN  R+IF+G    D +
Sbjct: 498 VILAESVPQQVSILANLSTLEIFFSNTVRSIFRGTNCIDSE 538


>ref|XP_002321307.1| predicted protein [Populus trichocarpa] gi|222862080|gb|EEE99622.1|
           predicted protein [Populus trichocarpa]
          Length = 897

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 45/103 (43%), Positives = 63/103 (61%)
 Frame = -3

Query: 326 KLVTLLQMYQATMKEISPLVILQTENLILDGLLQLFKEYIYSLERAISSKADVSDRIGSR 147
           K VT+LQ   A   +++PL+ LQ E+ IL GL+ LF EYI  LERAI+SK +      S 
Sbjct: 423 KFVTVLQ---AITGDVTPLIALQLEDSILRGLMNLFSEYIAILERAITSKTN-----DSG 474

Query: 146 IVLAETHSQQLSVLANSSALVQIVSNIARNIFKGFKVSDGQLL 18
           I+LAET  QQ+S+LAN S L  + S+   ++F      D +L+
Sbjct: 475 IILAETVPQQVSILANLSTLENLFSSTILSVFGSNNPIDSRLM 517


>ref|XP_003541366.1| PREDICTED: uncharacterized protein LOC100776739 [Glycine max]
          Length = 870

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 43/103 (41%), Positives = 67/103 (65%)
 Frame = -3

Query: 326 KLVTLLQMYQATMKEISPLVILQTENLILDGLLQLFKEYIYSLERAISSKADVSDRIGSR 147
           K+VTLLQ   A +++IS LV L   +L++ G+  LF EYI  LE+A++ +A  +++   R
Sbjct: 430 KVVTLLQ---AIVEDISSLVSLHMGSLVISGITILFTEYIVILEKALTYEASSTEQGSPR 486

Query: 146 IVLAETHSQQLSVLANSSALVQIVSNIARNIFKGFKVSDGQLL 18
           I LAE+  QQ+S+LAN S LVQ +S + ++IF      + Q+L
Sbjct: 487 IKLAESLPQQVSILANLSTLVQFLSIMVKDIFSSSDHIEFQVL 529


>ref|XP_002520172.1| protein with unknown function [Ricinus communis]
           gi|223540664|gb|EEF42227.1| protein with unknown
           function [Ricinus communis]
          Length = 774

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 32/77 (41%), Positives = 51/77 (66%), Gaps = 4/77 (5%)
 Frame = -3

Query: 305 MYQATMKEISPLVILQTENLILDGLLQLFKEYIYSLERAISSKADVSDRI---GSRIV-L 138
           M Q  +++++PL ILQ +   L+G+LQ+F  Y+  L RA+    +  D +   GS+IV +
Sbjct: 448 MVQEILEDVAPLEILQLDGPALEGVLQVFSAYVNLLIRALPGSMENEDNMEASGSKIVRM 507

Query: 137 AETHSQQLSVLANSSAL 87
           AET SQQ+++LAN+S L
Sbjct: 508 AETESQQIALLANASLL 524


>ref|XP_002323355.1| predicted protein [Populus trichocarpa] gi|222867985|gb|EEF05116.1|
           predicted protein [Populus trichocarpa]
          Length = 765

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 33/77 (42%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
 Frame = -3

Query: 305 MYQATMKEISPLVILQTENLILDGLLQLFKEYIYSLERAISSKADVSDRI---GSRIV-L 138
           M Q  +++  PL  LQ +   L G+LQ+F  Y+  L RA+ S A+  + +   GS+IV +
Sbjct: 427 MIQDFLEDAGPLESLQLDGSALGGVLQVFNSYVNLLMRALPSSAETEESLEGSGSKIVRI 486

Query: 137 AETHSQQLSVLANSSAL 87
           AET SQQL++LAN+S L
Sbjct: 487 AETESQQLALLANASLL 503


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