BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041844
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADB85398.1| putative retrotransposon protein [Phyllostachys e...    83   2e-14
emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]         82   3e-14
emb|CAE05537.2| OSJNBa0053B21.11 [Oryza sativa Japonica Group]         80   1e-13
gb|ADB85290.1| putative retrotransposon protein [Phyllostachys e...    80   2e-13
gb|ABA97403.1| retrotransposon protein, putative, unclassified [...    80   2e-13

>gb|ADB85398.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1348

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 39/96 (40%), Positives = 60/96 (62%)
 Frame = -2

Query: 289  IRYKQGKENRVADGLSRVVDEHGTCQAIMVVQPQWMKEVILSYAQDNVVQHLISQLLLTP 110
            I YK+GKEN+VAD LSR      +  AI +  P W++ V  SY  D   + L+ QL L P
Sbjct: 832  IEYKKGKENKVADALSR---RGNSVMAISIAVPSWIEAVTNSYQNDANCKELMEQLTLAP 888

Query: 109  NGVNNYSYSSGLVRYKSRLYIGRDQNLRQRLLQAIH 2
            N  + Y+ ++G++RYK R+Y+G+D  LR  ++ ++H
Sbjct: 889  NADSGYTLNAGVLRYKGRIYVGKDPELRLNIIHSLH 924


>emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]
          Length = 1311

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 42/96 (43%), Positives = 60/96 (62%)
 Frame = -2

Query: 289  IRYKQGKENRVADGLSRVVDEHGTCQAIMVVQPQWMKEVILSYAQDNVVQHLISQLLLTP 110
            I YK+GKEN+ AD LSR+          ++V P W+ E++ SYA D     L SQL +TP
Sbjct: 805  IEYKKGKENKAADALSRIPSVAQLFSTTIIV-PTWITEILASYATDPKCTALESQLRITP 863

Query: 109  NGVNNYSYSSGLVRYKSRLYIGRDQNLRQRLLQAIH 2
             G   Y+ +SG++RYK+RLY+G   +LR +L Q+ H
Sbjct: 864  QGHPPYTLTSGILRYKNRLYVGAGTDLRAKLQQSFH 899


>emb|CAE05537.2| OSJNBa0053B21.11 [Oryza sativa Japonica Group]
          Length = 1251

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 41/96 (42%), Positives = 60/96 (62%)
 Frame = -2

Query: 289  IRYKQGKENRVADGLSRVVDEHGTCQAIMVVQPQWMKEVILSYAQDNVVQHLISQLLLTP 110
            I YK+GKEN+ AD LSR   +   C AI +V P W+++V  SY  D     L++   L  
Sbjct: 864  IEYKKGKENKAADALSRRDTDGDKCLAITLVYPAWVEDVKNSYMGDEKYAMLVTGEELN- 922

Query: 109  NGVNNYSYSSGLVRYKSRLYIGRDQNLRQRLLQAIH 2
             G   ++  SGL+RYK+R+Y+G+  ++RQRLLQ+ H
Sbjct: 923  EGAEGFTLQSGLLRYKNRIYVGQSTDIRQRLLQSFH 958


>gb|ADB85290.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 592

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 40/96 (41%), Positives = 59/96 (61%)
 Frame = -2

Query: 289 IRYKQGKENRVADGLSRVVDEHGTCQAIMVVQPQWMKEVILSYAQDNVVQHLISQLLLTP 110
           + YK+G+EN+  D LSRV   +    AI  V P W+ EV+ SY  D   + LI+Q+ ++P
Sbjct: 215 VEYKRGRENKATDALSRV-RYNDQVVAISAVTPVWILEVLASYEGDEKCRDLITQISISP 273

Query: 109 NGVNNYSYSSGLVRYKSRLYIGRDQNLRQRLLQAIH 2
               NYS  +G++RYK RLYIG +  L+++LL   H
Sbjct: 274 TAQPNYSLKNGILRYKGRLYIGSNTGLKRQLLVTFH 309


>gb|ABA97403.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 562

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 41/96 (42%), Positives = 60/96 (62%)
 Frame = -2

Query: 289 IRYKQGKENRVADGLSRVVDEHGTCQAIMVVQPQWMKEVILSYAQDNVVQHLISQLLLTP 110
           I YK+GKEN+ AD LSR+          ++V P W+ E++ SYA D     L SQL +TP
Sbjct: 218 IEYKKGKENKAADALSRIPFVAQWFSTTIIV-PTWIIEILASYATDPKCTALESQLRITP 276

Query: 109 NGVNNYSYSSGLVRYKSRLYIGRDQNLRQRLLQAIH 2
            G  +Y+ + G++RYK+RLY+G   +LR +L Q+ H
Sbjct: 277 QGHPSYTLTGGILRYKNRLYVGAGTDLRAKLQQSFH 312