BLASTX nr result

ID: Coptis23_contig00041843 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041843
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADM26560.1| nuclear localized protein 1 [Nicotiana benthamiana]    112   2e-23
ref|XP_003631119.1| hypothetical protein MTR_8g107330 [Medicago ...   105   3e-21
ref|XP_002270398.2| PREDICTED: uncharacterized protein LOC100256...   102   4e-20
emb|CBI23269.3| unnamed protein product [Vitis vinifera]              102   4e-20
gb|AFK36611.1| unknown [Lotus japonicus]                              101   7e-20

>gb|ADM26560.1| nuclear localized protein 1 [Nicotiana benthamiana]
          Length = 430

 Score =  112 bits (281), Expect = 2e-23
 Identities = 62/142 (43%), Positives = 89/142 (62%), Gaps = 2/142 (1%)
 Frame = +2

Query: 2   NGLGDLIATLKDTSGTIGANIHRKVLTESEFGKDIAVGATLILHKVAVFSP--SPSAYYL 175
           NGLG L+ TLKD +G+IGA+IH KVL+E+++GKDI +G+ LIL KVAVF P  S S+YYL
Sbjct: 165 NGLGGLMVTLKDRTGSIGASIHHKVLSENQYGKDICIGSVLILQKVAVFCPSTSSSSYYL 224

Query: 176 NITLNNVLKVISQESGPPSSDTCVAAQVRCVASQVRGVASITGMIRKPAFVRLGTAETTT 355
           NITL N++KV  +ESGPPS  +  A +V     ++   AS     +  A  ++   +  T
Sbjct: 225 NITLRNLIKVFCKESGPPSMHSLAAYEVNHSDPEIAASASAR---KASALQKISIPDKET 281

Query: 356 DEDVSEYMKTKVSVGGETLPEE 421
            E++ +   T+    G  L +E
Sbjct: 282 TEEIIDVRTTEYMSAGGNLHKE 303


>ref|XP_003631119.1| hypothetical protein MTR_8g107330 [Medicago truncatula]
           gi|355525141|gb|AET05595.1| hypothetical protein
           MTR_8g107330 [Medicago truncatula]
          Length = 376

 Score =  105 bits (263), Expect = 3e-21
 Identities = 50/77 (64%), Positives = 62/77 (80%)
 Frame = +2

Query: 2   NGLGDLIATLKDTSGTIGANIHRKVLTESEFGKDIAVGATLILHKVAVFSPSPSAYYLNI 181
           NG GD+  TLKD +G++GA+IHRKV TE  F KDI VG+ L+L KVAVFSP+ S  YLNI
Sbjct: 122 NGFGDMTVTLKDPTGSVGASIHRKVFTEGGFRKDITVGSVLLLQKVAVFSPNGSTCYLNI 181

Query: 182 TLNNVLKVISQESGPPS 232
           TL+N+LKV S++SGPPS
Sbjct: 182 TLSNILKVFSKDSGPPS 198


>ref|XP_002270398.2| PREDICTED: uncharacterized protein LOC100256164 [Vitis vinifera]
          Length = 390

 Score =  102 bits (253), Expect = 4e-20
 Identities = 49/74 (66%), Positives = 60/74 (81%)
 Frame = +2

Query: 2   NGLGDLIATLKDTSGTIGANIHRKVLTESEFGKDIAVGATLILHKVAVFSPSPSAYYLNI 181
           N LGDL+ TLKD +GTIGA IH KVLTE +FG+DI+VG+ LIL KV VFSP+ S YYLN+
Sbjct: 144 NALGDLMVTLKDPTGTIGATIHHKVLTEGKFGRDISVGSVLILQKVTVFSPTRSTYYLNV 203

Query: 182 TLNNVLKVISQESG 223
           +L+NV+KV S  SG
Sbjct: 204 SLSNVVKVFSTGSG 217


>emb|CBI23269.3| unnamed protein product [Vitis vinifera]
          Length = 414

 Score =  102 bits (253), Expect = 4e-20
 Identities = 49/74 (66%), Positives = 60/74 (81%)
 Frame = +2

Query: 2   NGLGDLIATLKDTSGTIGANIHRKVLTESEFGKDIAVGATLILHKVAVFSPSPSAYYLNI 181
           N LGDL+ TLKD +GTIGA IH KVLTE +FG+DI+VG+ LIL KV VFSP+ S YYLN+
Sbjct: 144 NALGDLMVTLKDPTGTIGATIHHKVLTEGKFGRDISVGSVLILQKVTVFSPTRSTYYLNV 203

Query: 182 TLNNVLKVISQESG 223
           +L+NV+KV S  SG
Sbjct: 204 SLSNVVKVFSTGSG 217


>gb|AFK36611.1| unknown [Lotus japonicus]
          Length = 195

 Score =  101 bits (251), Expect = 7e-20
 Identities = 47/77 (61%), Positives = 59/77 (76%)
 Frame = +2

Query: 2   NGLGDLIATLKDTSGTIGANIHRKVLTESEFGKDIAVGATLILHKVAVFSPSPSAYYLNI 181
           NG GD+  TLKD +GT+GA++H KV TESEF KDI VG+ +++ KVAVFSP  S  YLNI
Sbjct: 110 NGFGDVSVTLKDPTGTVGASVHHKVFTESEFAKDINVGSVMLIQKVAVFSPRKSNCYLNI 169

Query: 182 TLNNVLKVISQESGPPS 232
           TL N++KV S + GPPS
Sbjct: 170 TLPNIVKVFSSDCGPPS 186


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