BLASTX nr result

ID: Coptis23_contig00041824 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041824
         (419 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28245.3| unnamed protein product [Vitis vinifera]              145   3e-33
ref|XP_003609404.1| Telomere-associated protein RIF1 [Medicago t...   136   2e-30
ref|XP_002325200.1| predicted protein [Populus trichocarpa] gi|2...   128   4e-28
ref|XP_003550815.1| PREDICTED: uncharacterized protein LOC100782...   115   4e-24
ref|XP_004150210.1| PREDICTED: uncharacterized protein LOC101204...   112   2e-23

>emb|CBI28245.3| unnamed protein product [Vitis vinifera]
          Length = 860

 Score =  145 bits (367), Expect = 3e-33
 Identities = 78/139 (56%), Positives = 96/139 (69%)
 Frame = -3

Query: 417 EIQTLITSISKTDKSFGYSNLLHLQEQSTQHPSVIHALLKCLYPXXXXXXXXXXXXXXXI 238
           EI+TLI+S +K+ KSF YS LL LQEQ +     I +L++                   I
Sbjct: 10  EIKTLISSNAKSYKSFAYSTLLQLQEQCSSDTCSIQSLVQESQSVLSQIIVDIADDDEEI 69

Query: 237 AAQALKCLGFMIYYPSLVSSVPEEVAQLVVECLVKLITTTKMKAVCNLGVWCISIQQFSP 58
           A+QALKCLGFMIY+PSLV ++P E A  +V+ L +LI TTKMK VCNLGVWCISIQQFS 
Sbjct: 70  ASQALKCLGFMIYHPSLVVAIPVEDANFIVQSLAELIVTTKMKTVCNLGVWCISIQQFSA 129

Query: 57  SFLANNFHPLLRAVIHALD 1
           SFLA +FH LLRA++HALD
Sbjct: 130 SFLATHFHCLLRAIVHALD 148


>ref|XP_003609404.1| Telomere-associated protein RIF1 [Medicago truncatula]
           gi|355510459|gb|AES91601.1| Telomere-associated protein
           RIF1 [Medicago truncatula]
          Length = 1121

 Score =  136 bits (342), Expect = 2e-30
 Identities = 72/139 (51%), Positives = 91/139 (65%)
 Frame = -3

Query: 417 EIQTLITSISKTDKSFGYSNLLHLQEQSTQHPSVIHALLKCLYPXXXXXXXXXXXXXXXI 238
           EIQTLI+S   ++KS GYS LL  Q+ S  +PS + +L +                   I
Sbjct: 8   EIQTLISSNDNSNKSSGYSTLLQFQQHSCINPSSLQSLAQNSNSIISSTLSDIEHHDEEI 67

Query: 237 AAQALKCLGFMIYYPSLVSSVPEEVAQLVVECLVKLITTTKMKAVCNLGVWCISIQQFSP 58
           AAQALKCLGFMIY+PS+VS +  +   LV++ L KLITTTK+K VCNLGVWC S+QQ   
Sbjct: 68  AAQALKCLGFMIYHPSIVSELRVDDVNLVLDSLAKLITTTKLKTVCNLGVWCFSVQQLGV 127

Query: 57  SFLANNFHPLLRAVIHALD 1
           SFL  +FH LLRA++HALD
Sbjct: 128 SFLVAHFHSLLRAIVHALD 146


>ref|XP_002325200.1| predicted protein [Populus trichocarpa] gi|222866634|gb|EEF03765.1|
           predicted protein [Populus trichocarpa]
          Length = 1116

 Score =  128 bits (322), Expect = 4e-28
 Identities = 67/134 (50%), Positives = 87/134 (64%)
 Frame = -3

Query: 402 ITSISKTDKSFGYSNLLHLQEQSTQHPSVIHALLKCLYPXXXXXXXXXXXXXXXIAAQAL 223
           I S+  ++KS  YS L HLQEQS   PS++  L                     +AAQAL
Sbjct: 11  IKSLIYSNKSLAYSTLSHLQEQSVNDPSLLQTLADNSQDLVSLITVDISIDDEEVAAQAL 70

Query: 222 KCLGFMIYYPSLVSSVPEEVAQLVVECLVKLITTTKMKAVCNLGVWCISIQQFSPSFLAN 43
           KC GFMIY+PSLVS++P + A LV+E L K+I +TK+K+VCNLGVWCIS+QQF  S L  
Sbjct: 71  KCSGFMIYHPSLVSTIPVDDANLVLEALAKVIMSTKIKSVCNLGVWCISMQQFEASILVG 130

Query: 42  NFHPLLRAVIHALD 1
            F+ +L+AV+HALD
Sbjct: 131 CFNSVLQAVVHALD 144


>ref|XP_003550815.1| PREDICTED: uncharacterized protein LOC100782723 [Glycine max]
          Length = 1894

 Score =  115 bits (288), Expect = 4e-24
 Identities = 64/140 (45%), Positives = 84/140 (60%), Gaps = 1/140 (0%)
 Frame = -3

Query: 417 EIQTLITSISKTDKSFGYSNLLHLQEQSTQHPSVIHALLKCLYPXXXXXXXXXXXXXXXI 238
           EI +LI S  K +KS GYS L   Q+ S  +P  + +L                      
Sbjct: 7   EIHSLIYSDDKFNKSSGYSALFQFQQHSCANPFSLQSLAHSSQSIISSIVSDISNDHDEE 66

Query: 237 -AAQALKCLGFMIYYPSLVSSVPEEVAQLVVECLVKLITTTKMKAVCNLGVWCISIQQFS 61
            + QALKCLGFM+Y+PS+VS +  + A LV+  L KLITTTK+K+ CNLGVWC+S+QQ  
Sbjct: 67  ISTQALKCLGFMLYHPSVVSILRVDDANLVLGALPKLITTTKLKSACNLGVWCLSVQQLG 126

Query: 60  PSFLANNFHPLLRAVIHALD 1
            SFL  +F  LLRA++HALD
Sbjct: 127 ASFLDTHFPSLLRAIVHALD 146


>ref|XP_004150210.1| PREDICTED: uncharacterized protein LOC101204982 [Cucumis sativus]
          Length = 660

 Score =  112 bits (281), Expect = 2e-23
 Identities = 64/139 (46%), Positives = 83/139 (59%)
 Frame = -3

Query: 417 EIQTLITSISKTDKSFGYSNLLHLQEQSTQHPSVIHALLKCLYPXXXXXXXXXXXXXXXI 238
           EI TLI S  K  KS  YS+LL +Q+ S      I AL +                   I
Sbjct: 10  EINTLICSGLKAHKSLAYSSLLQIQQASIPDHISIDALAEFSRDSIHHIVSDTQDEDEEI 69

Query: 237 AAQALKCLGFMIYYPSLVSSVPEEVAQLVVECLVKLITTTKMKAVCNLGVWCISIQQFSP 58
           AAQALKCLGF+IY+ S+V+++P + A  + + L +LI+ T++K+VCNLGVWCISIQQ   
Sbjct: 70  AAQALKCLGFIIYHSSIVAAIPAKEANFIFKSLAELISRTRLKSVCNLGVWCISIQQLDS 129

Query: 57  SFLANNFHPLLRAVIHALD 1
             LA +F  LL AV HALD
Sbjct: 130 DILAVHFQSLLLAVTHALD 148


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