BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041804
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278681.2| PREDICTED: pentatricopeptide repeat-containi...   135   3e-30
emb|CBI22251.3| unnamed protein product [Vitis vinifera]              135   3e-30
emb|CAN60969.1| hypothetical protein VITISV_033859 [Vitis vinifera]   133   1e-29
ref|XP_002530005.1| pentatricopeptide repeat-containing protein,...   127   7e-28
ref|XP_003551744.1| PREDICTED: pentatricopeptide repeat-containi...   122   2e-26

>ref|XP_002278681.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Vitis vinifera]
          Length = 663

 Score =  135 bits (341), Expect = 3e-30
 Identities = 63/79 (79%), Positives = 69/79 (87%)
 Frame = +1

Query: 1   MISGYCQAKRSSQALELFGEMRDSVIRPDEVTMVSVISACTNSGDLEAGLNVHKYIDENG 180
           M+SGY QAKRS +ALELF EMRD  +RPDEV MVSVISACT+ GDLE G  VH+YIDENG
Sbjct: 389 MVSGYAQAKRSREALELFREMRDVGVRPDEVAMVSVISACTSLGDLETGFEVHRYIDENG 448

Query: 181 FGWMISLCNALIDMYAKCG 237
           FGWM+SLCNALIDMYAKCG
Sbjct: 449 FGWMVSLCNALIDMYAKCG 467


>emb|CBI22251.3| unnamed protein product [Vitis vinifera]
          Length = 476

 Score =  135 bits (341), Expect = 3e-30
 Identities = 63/79 (79%), Positives = 69/79 (87%)
 Frame = +1

Query: 1   MISGYCQAKRSSQALELFGEMRDSVIRPDEVTMVSVISACTNSGDLEAGLNVHKYIDENG 180
           M+SGY QAKRS +ALELF EMRD  +RPDEV MVSVISACT+ GDLE G  VH+YIDENG
Sbjct: 202 MVSGYAQAKRSREALELFREMRDVGVRPDEVAMVSVISACTSLGDLETGFEVHRYIDENG 261

Query: 181 FGWMISLCNALIDMYAKCG 237
           FGWM+SLCNALIDMYAKCG
Sbjct: 262 FGWMVSLCNALIDMYAKCG 280


>emb|CAN60969.1| hypothetical protein VITISV_033859 [Vitis vinifera]
          Length = 722

 Score =  133 bits (335), Expect = 1e-29
 Identities = 62/79 (78%), Positives = 68/79 (86%)
 Frame = +1

Query: 1   MISGYCQAKRSSQALELFGEMRDSVIRPDEVTMVSVISACTNSGDLEAGLNVHKYIDENG 180
           M+SGY QAKRS +ALELF EMRD  +RPDEV MV VISACT+ GDLE G  VH+YIDENG
Sbjct: 448 MVSGYAQAKRSREALELFREMRDVGVRPDEVAMVIVISACTSLGDLETGFEVHRYIDENG 507

Query: 181 FGWMISLCNALIDMYAKCG 237
           FGWM+SLCNALIDMYAKCG
Sbjct: 508 FGWMVSLCNALIDMYAKCG 526


>ref|XP_002530005.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223530484|gb|EEF32367.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 499

 Score =  127 bits (320), Expect = 7e-28
 Identities = 59/79 (74%), Positives = 69/79 (87%)
 Frame = +1

Query: 1   MISGYCQAKRSSQALELFGEMRDSVIRPDEVTMVSVISACTNSGDLEAGLNVHKYIDENG 180
           M+SGY +A  S +ALELF EM D+ IRPDEVT+VSVISACTN GD+E G+NVH YI+ENG
Sbjct: 225 MVSGYSKANCSREALELFWEMSDAGIRPDEVTIVSVISACTNLGDVETGMNVHSYINENG 284

Query: 181 FGWMISLCNALIDMYAKCG 237
           FGWM+SLCNALI+MYAKCG
Sbjct: 285 FGWMVSLCNALINMYAKCG 303


>ref|XP_003551744.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Glycine max]
          Length = 488

 Score =  122 bits (307), Expect = 2e-26
 Identities = 53/79 (67%), Positives = 68/79 (86%)
 Frame = +1

Query: 1   MISGYCQAKRSSQALELFGEMRDSVIRPDEVTMVSVISACTNSGDLEAGLNVHKYIDENG 180
           M++GY QAKR  +ALELFGEMR S + PDEVTMVS++SAC + GD+E G+ VH++++ENG
Sbjct: 214 MLTGYSQAKRPREALELFGEMRRSGVWPDEVTMVSLVSACASLGDMETGMMVHRFVEENG 273

Query: 181 FGWMISLCNALIDMYAKCG 237
           FGWM++LCNALIDMY KCG
Sbjct: 274 FGWMVALCNALIDMYGKCG 292