BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041799
         (348 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat...   180   9e-44
ref|XP_002327523.1| predicted protein [Populus trichocarpa] gi|2...   173   1e-41
ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat...   162   3e-38
ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   161   6e-38
ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat...   161   6e-38

>ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930 [Vitis vinifera]
          Length = 724

 Score =  180 bits (457), Expect = 9e-44
 Identities = 79/115 (68%), Positives = 97/115 (84%)
 Frame = -2

Query: 347 GNTEGALEVFEEMPQRDKFSWTSMIHGLAVNGCGEEALDLFNKMLRASVAPDEVTCIGVL 168
           GN E A+ +F  MP RDK SWT++I GLA+NG GEEALD+F++ML+AS+ PDEVTCIGVL
Sbjct: 401 GNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVL 460

Query: 167 CACTHAGMVDEGRDFFVKMITDHNIEPNVSHYGCMIDLLGRAGQLREAQEMISNM 3
           CACTH+GMVD+G+ FF +M T H IEPNV+HYGCM+DLLGRAG L+EA E+I NM
Sbjct: 461 CACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNM 515



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 38/111 (34%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
 Frame = -2

Query: 332 ALEVFEEMPQRDKFSWTSMIHGLAVNGCGEEALDLFNKMLRASVAPDEVTCIGVLCACTH 153
           A   F++MP+RD  SWT+MI G       +E L LF +M  A++ PDE T + +L AC H
Sbjct: 305 ARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAH 364

Query: 152 AGMVDEGRDFFVKMITDHNIEPNVSHYG-CMIDLLGRAGQLREAQEMISNM 3
            G ++ G   ++K   D N     S  G  +ID+    G + +A  + + M
Sbjct: 365 LGALELGE--WIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAM 413


>ref|XP_002327523.1| predicted protein [Populus trichocarpa] gi|222836077|gb|EEE74498.1|
           predicted protein [Populus trichocarpa]
          Length = 635

 Score =  173 bits (439), Expect = 1e-41
 Identities = 76/115 (66%), Positives = 95/115 (82%)
 Frame = -2

Query: 347 GNTEGALEVFEEMPQRDKFSWTSMIHGLAVNGCGEEALDLFNKMLRASVAPDEVTCIGVL 168
           GN E AL +F  +PQRDKF+WT+M+ GLA+NGCGEEAL++F++ML+ASV PDEVT +GVL
Sbjct: 312 GNVEMALSIFNTLPQRDKFTWTAMVVGLAINGCGEEALNMFSQMLKASVTPDEVTYVGVL 371

Query: 167 CACTHAGMVDEGRDFFVKMITDHNIEPNVSHYGCMIDLLGRAGQLREAQEMISNM 3
            ACTH GMVDEG+ FF  M   H IEPN++HYGCM+DLLG+AG L+EA E+I NM
Sbjct: 372 SACTHTGMVDEGKKFFASMTARHGIEPNIAHYGCMVDLLGKAGHLKEAHEIIKNM 426



 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
 Frame = -2

Query: 347 GNTEGALEVFEEMPQRDKFSWTSMIHGLAVNGCGEEALDLFNKMLRASVAPDEVTCIGVL 168
           G  + A + F +MP+RD  SWT+MI G     C +EAL LF +M  + + PDE T + VL
Sbjct: 211 GQVDAARKYFHKMPERDHVSWTAMIDGYLRLNCYKEALMLFREMQTSKIKPDEFTMVSVL 270

Query: 167 CACTHAGMVDEGRDFFVKMITDHNIEPNVSHYG-CMIDLLGRAGQLREAQEMISNM 3
            AC   G ++ G   +++   D N   N +  G  +ID+  + G +  A  + + +
Sbjct: 271 TACAQLGALELGE--WIRTYIDKNKVKNDTFVGNALIDMYFKCGNVEMALSIFNTL 324


>ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Glycine max]
          Length = 712

 Score =  162 bits (409), Expect = 3e-38
 Identities = 73/115 (63%), Positives = 93/115 (80%)
 Frame = -2

Query: 347 GNTEGALEVFEEMPQRDKFSWTSMIHGLAVNGCGEEALDLFNKMLRASVAPDEVTCIGVL 168
           GN   A +VF+EM  +DKF+WT+MI GLA+NG GEEAL +F+ M+ AS+ PDE+T IGVL
Sbjct: 389 GNVGKAKKVFKEMHHKDKFTWTAMIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVL 448

Query: 167 CACTHAGMVDEGRDFFVKMITDHNIEPNVSHYGCMIDLLGRAGQLREAQEMISNM 3
           CACTHAGMV++G+ FF+ M   H I+PNV+HYGCM+DLLGRAG+L EA E+I NM
Sbjct: 449 CACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNM 503



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 40/116 (34%), Positives = 64/116 (55%), Gaps = 1/116 (0%)
 Frame = -2

Query: 347 GNTEGALEVFEEMPQRDKFSWTSMIHGLAVNGCGEEALDLFNKMLRASVAPDEVTCIGVL 168
           G  + A + F+++P+RD  SWT+MI G        EAL LF +M  ++V PDE T + +L
Sbjct: 288 GQIDLARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSIL 347

Query: 167 CACTHAGMVDEGRDFFVKMITDHNIEPNVSHYG-CMIDLLGRAGQLREAQEMISNM 3
            AC H G ++ G   +VK   D N   N +  G  +ID+  + G + +A+++   M
Sbjct: 348 TACAHLGALELGE--WVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEM 401


>ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g15930-like [Cucumis
           sativus]
          Length = 744

 Score =  161 bits (407), Expect = 6e-38
 Identities = 71/115 (61%), Positives = 95/115 (82%)
 Frame = -2

Query: 347 GNTEGALEVFEEMPQRDKFSWTSMIHGLAVNGCGEEALDLFNKMLRASVAPDEVTCIGVL 168
           G+ + A  +F EM QRDKF+WT+MI GLAVNG GE+ALD+F+ ML+AS+ PDE+T IGVL
Sbjct: 421 GDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVL 480

Query: 167 CACTHAGMVDEGRDFFVKMITDHNIEPNVSHYGCMIDLLGRAGQLREAQEMISNM 3
            ACTH G+VD+GR +F++M + H IEPN++HYGC++DLL RAG+L+EA E+I NM
Sbjct: 481 SACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENM 535



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 38/116 (32%), Positives = 64/116 (55%), Gaps = 1/116 (0%)
 Frame = -2

Query: 347 GNTEGALEVFEEMPQRDKFSWTSMIHGLAVNGCGEEALDLFNKMLRASVAPDEVTCIGVL 168
           G  + A   F++MP++D  SWT+MI G   +   +EAL+LF  M   +V PDE T + VL
Sbjct: 320 GEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVL 379

Query: 167 CACTHAGMVDEGRDFFVKMITDHN-IEPNVSHYGCMIDLLGRAGQLREAQEMISNM 3
            AC H G ++ G   +++   D N I+ ++     +ID+  + G + +A+ +   M
Sbjct: 380 TACAHLGALELGE--WIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREM 433


>ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Cucumis sativus]
          Length = 723

 Score =  161 bits (407), Expect = 6e-38
 Identities = 71/115 (61%), Positives = 95/115 (82%)
 Frame = -2

Query: 347 GNTEGALEVFEEMPQRDKFSWTSMIHGLAVNGCGEEALDLFNKMLRASVAPDEVTCIGVL 168
           G+ + A  +F EM QRDKF+WT+MI GLAVNG GE+ALD+F+ ML+AS+ PDE+T IGVL
Sbjct: 400 GDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVL 459

Query: 167 CACTHAGMVDEGRDFFVKMITDHNIEPNVSHYGCMIDLLGRAGQLREAQEMISNM 3
            ACTH G+VD+GR +F++M + H IEPN++HYGC++DLL RAG+L+EA E+I NM
Sbjct: 460 SACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIENM 514



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 38/116 (32%), Positives = 64/116 (55%), Gaps = 1/116 (0%)
 Frame = -2

Query: 347 GNTEGALEVFEEMPQRDKFSWTSMIHGLAVNGCGEEALDLFNKMLRASVAPDEVTCIGVL 168
           G  + A   F++MP++D  SWT+MI G   +   +EAL+LF  M   +V PDE T + VL
Sbjct: 299 GEIDVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVL 358

Query: 167 CACTHAGMVDEGRDFFVKMITDHN-IEPNVSHYGCMIDLLGRAGQLREAQEMISNM 3
            AC H G ++ G   +++   D N I+ ++     +ID+  + G + +A+ +   M
Sbjct: 359 TACAHLGALELGE--WIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREM 412