BLASTX nr result
ID: Coptis23_contig00041789
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis23_contig00041789
(267 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA80335.1| ubiquitin [Tetrahymena pyriformis] 64 1e-08
gb|AAM51199.1| polyubiquitin [Lotharella amoeboformis] 63 3e-08
gb|AAM51225.1| polyubiquitin [Bigelowiella natans] 63 3e-08
gb|AAM51223.1| polyubiquitin [Bigelowiella natans] gi|27734402|g... 63 3e-08
sp|P0CG73.1|UBI1P_CANAL RecName: Full=Polyubiquitin; Contains: R... 63 3e-08
>emb|CAA80335.1| ubiquitin [Tetrahymena pyriformis]
Length = 303
Score = 63.9 bits (154), Expect = 1e-08
Identities = 34/72 (47%), Positives = 47/72 (65%)
Frame = +1
Query: 46 LFFAGNWLENERKVDDYDIKSGSVISVFLDSGFRTQIYVKMSQTGNAITLDVDMRDTVLT 225
L FAG LE+ER V DY+I+ S + + L Q++VK + TG ITLD+D D +
Sbjct: 119 LIFAGKQLEDERTVSDYNIQKESTLHLVLRLRGGMQVFVK-TLTGKTITLDIDSSDNIEN 177
Query: 226 VKSRIQNKEGIP 261
VK++IQ+KEGIP
Sbjct: 178 VKAKIQDKEGIP 189
Score = 59.3 bits (142), Expect = 3e-07
Identities = 34/73 (46%), Positives = 47/73 (64%)
Frame = +1
Query: 46 LFFAGNWLENERKVDDYDIKSGSVISVFLDSGFRTQIYVKMSQTGNAITLDVDMRDTVLT 225
L FAG LE+ R V DY+I+ S + + L QI++K + TG ITLDV+ D +
Sbjct: 195 LIFAGKQLEDGRTVTDYNIQKESTLHLVLRLRGGMQIFMK-TLTGKTITLDVNSADNIEK 253
Query: 226 VKSRIQNKEGIPV 264
VK++IQ+KEGIPV
Sbjct: 254 VKAQIQDKEGIPV 266
Score = 58.9 bits (141), Expect = 4e-07
Identities = 32/72 (44%), Positives = 45/72 (62%)
Frame = +1
Query: 46 LFFAGNWLENERKVDDYDIKSGSVISVFLDSGFRTQIYVKMSQTGNAITLDVDMRDTVLT 225
L FAG LE+ R V DY+I+ S + + L Q++VK + TG ITLDV D +
Sbjct: 43 LIFAGKQLEDGRTVSDYNIQKESTVHLVLRLRGGMQVFVK-TLTGKTITLDVAQTDNIEN 101
Query: 226 VKSRIQNKEGIP 261
+K++IQ+KEGIP
Sbjct: 102 IKAKIQDKEGIP 113
>gb|AAM51199.1| polyubiquitin [Lotharella amoeboformis]
Length = 175
Score = 62.8 bits (151), Expect = 3e-08
Identities = 37/73 (50%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Frame = +1
Query: 46 LFFAGNWLENERKVDDYDIKSGSVISVFLD-SGFRTQIYVKMSQTGNAITLDVDMRDTVL 222
L FAG LE+ R + DY+I+ S + + L G QI+VK + TG ITLDVD DT+
Sbjct: 36 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGAMQIFVK-TLTGKTITLDVDSSDTIN 94
Query: 223 TVKSRIQNKEGIP 261
TVK +IQ+KEGIP
Sbjct: 95 TVKQKIQDKEGIP 107
>gb|AAM51225.1| polyubiquitin [Bigelowiella natans]
Length = 320
Score = 62.8 bits (151), Expect = 3e-08
Identities = 37/73 (50%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Frame = +1
Query: 46 LFFAGNWLENERKVDDYDIKSGSVISVFLD-SGFRTQIYVKMSQTGNAITLDVDMRDTVL 222
L FAG LE+ R + DY+I+ S + + L G QI+VK + TG ITLDVD DT+
Sbjct: 45 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSMQIFVK-TLTGKTITLDVDSSDTIN 103
Query: 223 TVKSRIQNKEGIP 261
TVK +IQ+KEGIP
Sbjct: 104 TVKQKIQDKEGIP 116
Score = 62.8 bits (151), Expect = 3e-08
Identities = 37/73 (50%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Frame = +1
Query: 46 LFFAGNWLENERKVDDYDIKSGSVISVFLD-SGFRTQIYVKMSQTGNAITLDVDMRDTVL 222
L FAG LE+ R + DY+I+ S + + L G QI+VK + TG ITLDVD DT+
Sbjct: 122 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSMQIFVK-TLTGKTITLDVDSSDTIN 180
Query: 223 TVKSRIQNKEGIP 261
TVK +IQ+KEGIP
Sbjct: 181 TVKQKIQDKEGIP 193
Score = 62.8 bits (151), Expect = 3e-08
Identities = 37/73 (50%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Frame = +1
Query: 46 LFFAGNWLENERKVDDYDIKSGSVISVFLD-SGFRTQIYVKMSQTGNAITLDVDMRDTVL 222
L FAG LE+ R + DY+I+ S + + L G QI+VK + TG ITLDVD DT+
Sbjct: 199 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSMQIFVK-TLTGKTITLDVDSSDTIN 257
Query: 223 TVKSRIQNKEGIP 261
TVK +IQ+KEGIP
Sbjct: 258 TVKQKIQDKEGIP 270
>gb|AAM51223.1| polyubiquitin [Bigelowiella natans] gi|27734402|gb|AAM51224.1|
polyubiquitin [Bigelowiella natans]
Length = 306
Score = 62.8 bits (151), Expect = 3e-08
Identities = 37/73 (50%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Frame = +1
Query: 46 LFFAGNWLENERKVDDYDIKSGSVISVFLD-SGFRTQIYVKMSQTGNAITLDVDMRDTVL 222
L FAG LE+ R + DY+I+ S + + L G QI+VK + TG ITLDVD DT+
Sbjct: 45 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSMQIFVK-TLTGKTITLDVDSSDTIN 103
Query: 223 TVKSRIQNKEGIP 261
TVK +IQ+KEGIP
Sbjct: 104 TVKQKIQDKEGIP 116
Score = 62.8 bits (151), Expect = 3e-08
Identities = 37/73 (50%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Frame = +1
Query: 46 LFFAGNWLENERKVDDYDIKSGSVISVFLD-SGFRTQIYVKMSQTGNAITLDVDMRDTVL 222
L FAG LE+ R + DY+I+ S + + L G QI+VK + TG ITLDVD DT+
Sbjct: 122 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSMQIFVK-TLTGKTITLDVDSSDTIN 180
Query: 223 TVKSRIQNKEGIP 261
TVK +IQ+KEGIP
Sbjct: 181 TVKQKIQDKEGIP 193
Score = 62.8 bits (151), Expect = 3e-08
Identities = 37/73 (50%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Frame = +1
Query: 46 LFFAGNWLENERKVDDYDIKSGSVISVFLD-SGFRTQIYVKMSQTGNAITLDVDMRDTVL 222
L FAG LE+ R + DY+I+ S + + L G QI+VK + TG ITLDVD DT+
Sbjct: 199 LIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGSMQIFVK-TLTGKTITLDVDSSDTIN 257
Query: 223 TVKSRIQNKEGIP 261
TVK +IQ+KEGIP
Sbjct: 258 TVKQKIQDKEGIP 270
>sp|P0CG73.1|UBI1P_CANAL RecName: Full=Polyubiquitin; Contains: RecName:
Full=Ubiquitin-related; Contains: RecName:
Full=Ubiquitin; Flags: Precursor
gi|1143188|gb|AAA84868.1| ubiquitin precursor [Candida
albicans]
Length = 229
Score = 62.8 bits (151), Expect = 3e-08
Identities = 35/72 (48%), Positives = 48/72 (66%)
Frame = +1
Query: 46 LFFAGNWLENERKVDDYDIKSGSVISVFLDSGFRTQIYVKMSQTGNAITLDVDMRDTVLT 225
L FAG LE+ R + DY+I+ S + + L S QI+VK + TG ITL+V+ DT+
Sbjct: 43 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRSRGGMQIFVK-TLTGKTITLEVESSDTIDN 101
Query: 226 VKSRIQNKEGIP 261
VKS+IQ+KEGIP
Sbjct: 102 VKSKIQDKEGIP 113
Score = 60.5 bits (145), Expect = 1e-07
Identities = 34/72 (47%), Positives = 47/72 (65%)
Frame = +1
Query: 46 LFFAGNWLENERKVDDYDIKSGSVISVFLDSGFRTQIYVKMSQTGNAITLDVDMRDTVLT 225
L FAG LE+ R + DY+I+ S + + L QI+VK + TG ITL+V+ DT+
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVK-TLTGKTITLEVESSDTIDN 177
Query: 226 VKSRIQNKEGIP 261
VKS+IQ+KEGIP
Sbjct: 178 VKSKIQDKEGIP 189