BLASTX nr result

ID: Coptis23_contig00041785 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041785
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272108.2| PREDICTED: protein CHUP1, chloroplastic [Vit...   118   6e-25
emb|CBI28895.3| unnamed protein product [Vitis vinifera]              118   6e-25
ref|XP_003635366.1| PREDICTED: uncharacterized protein LOC100266...   115   4e-24
emb|CBI38446.3| unnamed protein product [Vitis vinifera]              115   4e-24
ref|XP_002317226.1| predicted protein [Populus trichocarpa] gi|2...   114   6e-24

>ref|XP_002272108.2| PREDICTED: protein CHUP1, chloroplastic [Vitis vinifera]
          Length = 210

 Score =  118 bits (295), Expect = 6e-25
 Identities = 55/83 (66%), Positives = 72/83 (86%)
 Frame = -3

Query: 249 IETPIGSLLDRVENYFNKIKGEMDALDRSKDDDAKRFQSHKITFDFHILVRIKESMVDLS 70
           +  P+  LLD+VE+YFNKIK E+DAL+R+KD+++KRFQSH I FDF+IL+RIKESMVD+S
Sbjct: 75  VAPPLRQLLDKVESYFNKIKRELDALERTKDEESKRFQSHNIHFDFNILMRIKESMVDVS 134

Query: 69  SSCMEFTLKERREAKAASDGEAG 1
           SSCME  L+ERR+AKAA++ E G
Sbjct: 135 SSCMELALQERRQAKAAANAETG 157


>emb|CBI28895.3| unnamed protein product [Vitis vinifera]
          Length = 653

 Score =  118 bits (295), Expect = 6e-25
 Identities = 55/83 (66%), Positives = 72/83 (86%)
 Frame = -3

Query: 249 IETPIGSLLDRVENYFNKIKGEMDALDRSKDDDAKRFQSHKITFDFHILVRIKESMVDLS 70
           +  P+  LLD+VE+YFNKIK E+DAL+R+KD+++KRFQSH I FDF+IL+RIKESMVD+S
Sbjct: 518 VAPPLRQLLDKVESYFNKIKRELDALERTKDEESKRFQSHNIHFDFNILMRIKESMVDVS 577

Query: 69  SSCMEFTLKERREAKAASDGEAG 1
           SSCME  L+ERR+AKAA++ E G
Sbjct: 578 SSCMELALQERRQAKAAANAETG 600


>ref|XP_003635366.1| PREDICTED: uncharacterized protein LOC100266951 [Vitis vinifera]
          Length = 1206

 Score =  115 bits (288), Expect = 4e-24
 Identities = 56/81 (69%), Positives = 70/81 (86%), Gaps = 1/81 (1%)
 Frame = -3

Query: 240 PIGSLLDRVENYFNKIKGEMDALDRSKDDDAKRFQSHKITFDFHILVRIKESMVDLSSSC 61
           P+G LLD+ E+YF+KIKGE+DAL+R+KD+++K+FQSH I FDF ILVRIKES VD+SSSC
Sbjct: 644 PLGQLLDKAEHYFSKIKGEIDALERTKDEESKKFQSHNIHFDFGILVRIKESAVDVSSSC 703

Query: 60  MEFTLKERREAKA-ASDGEAG 1
           MEF LKERREAKA  + G +G
Sbjct: 704 MEFALKERREAKAMENQGSSG 724


>emb|CBI38446.3| unnamed protein product [Vitis vinifera]
          Length = 713

 Score =  115 bits (288), Expect = 4e-24
 Identities = 56/81 (69%), Positives = 70/81 (86%), Gaps = 1/81 (1%)
 Frame = -3

Query: 240 PIGSLLDRVENYFNKIKGEMDALDRSKDDDAKRFQSHKITFDFHILVRIKESMVDLSSSC 61
           P+G LLD+ E+YF+KIKGE+DAL+R+KD+++K+FQSH I FDF ILVRIKES VD+SSSC
Sbjct: 580 PLGQLLDKAEHYFSKIKGEIDALERTKDEESKKFQSHNIHFDFGILVRIKESAVDVSSSC 639

Query: 60  MEFTLKERREAKA-ASDGEAG 1
           MEF LKERREAKA  + G +G
Sbjct: 640 MEFALKERREAKAMENQGSSG 660


>ref|XP_002317226.1| predicted protein [Populus trichocarpa] gi|222860291|gb|EEE97838.1|
           predicted protein [Populus trichocarpa]
          Length = 792

 Score =  114 bits (286), Expect = 6e-24
 Identities = 52/77 (67%), Positives = 69/77 (89%)
 Frame = -3

Query: 249 IETPIGSLLDRVENYFNKIKGEMDALDRSKDDDAKRFQSHKITFDFHILVRIKESMVDLS 70
           I+ P+G LLD+ E YFNKIKG++DAL+R+KD+++K+F+SH I FDF+ILV+IKESMVD+S
Sbjct: 658 IQPPLGQLLDKAECYFNKIKGDLDALERTKDEESKKFRSHNIDFDFYILVQIKESMVDVS 717

Query: 69  SSCMEFTLKERREAKAA 19
           S+CME  LKERR+AKAA
Sbjct: 718 SNCMELALKERRQAKAA 734


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