BLASTX nr result

ID: Coptis23_contig00041779 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041779
         (710 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72742.1| hypothetical protein VITISV_042733 [Vitis vinifera]   122   7e-26
ref|XP_002272089.1| PREDICTED: probable WRKY transcription facto...   120   2e-25
ref|XP_003532648.1| PREDICTED: probable WRKY transcription facto...   108   1e-21
ref|XP_002283603.1| PREDICTED: probable WRKY transcription facto...   106   5e-21
ref|XP_003617423.1| WRKY transcription factor [Medicago truncatu...   105   7e-21

>emb|CAN72742.1| hypothetical protein VITISV_042733 [Vitis vinifera]
          Length = 339

 Score =  122 bits (306), Expect = 7e-26
 Identities = 79/199 (39%), Positives = 95/199 (47%), Gaps = 2/199 (1%)
 Frame = +2

Query: 119 SMSDHRARDLYSLNIYHEDQSGITGTSTFPMST--DPSPFHQIPSVTANEYQHGFDPMNM 292
           SMSD   RDLY  + +H+D+ GI G + F  S   D      + +  +     GFDP  M
Sbjct: 20  SMSDE-PRDLYYHDPFHDDRHGIIGNTGFSFSAINDSKADSSMRAAPSPPNLQGFDPPYM 78

Query: 293 SFTDYLQGSVDYGALERALDLSRSSSEVFSSIDGTGQNTGGAIETVGSGXXXXXXXXXXX 472
           SFTD L GS+DY +L  A  LS SSSE FS ++G  +      +   SG           
Sbjct: 79  SFTDCLNGSLDYNSLTTAFGLSPSSSEAFSPVEGNHKPVANLGDLGASGEIAGTPNSSIS 138

Query: 473 XXXXXXXXXXXXXKSKKNRQQKAGCEDGNXXXXXXXXXXXXXXXXXXXXXXAFMTESEVD 652
                        KSKK+RQ K    DG                       AFMT+SEVD
Sbjct: 139 SSSTEAGAEEDSSKSKKDRQAKVSELDGGDGSKKVNKPKKKAEKRQREPRFAFMTKSEVD 198

Query: 653 HLEDGYRWRKYGQKAVKNS 709
           HLEDGYRWRKYGQKAVKNS
Sbjct: 199 HLEDGYRWRKYGQKAVKNS 217


>ref|XP_002272089.1| PREDICTED: probable WRKY transcription factor 28 [Vitis vinifera]
           gi|297740645|emb|CBI30827.3| unnamed protein product
           [Vitis vinifera]
          Length = 319

 Score =  120 bits (302), Expect = 2e-25
 Identities = 78/198 (39%), Positives = 94/198 (47%), Gaps = 2/198 (1%)
 Frame = +2

Query: 122 MSDHRARDLYSLNIYHEDQSGITGTSTFPMST--DPSPFHQIPSVTANEYQHGFDPMNMS 295
           MSD   RDLY  + +H+D+ GI G + F  S   D      + +  +     GFDP  MS
Sbjct: 1   MSDE-PRDLYYHDPFHDDRHGIIGNTGFSFSAINDSKADSSMRAAPSPPNLQGFDPPYMS 59

Query: 296 FTDYLQGSVDYGALERALDLSRSSSEVFSSIDGTGQNTGGAIETVGSGXXXXXXXXXXXX 475
           FTD L GS+DY +L  A  LS SSSE FS ++G  +      +   SG            
Sbjct: 60  FTDCLNGSLDYNSLTTAFGLSPSSSEAFSPVEGNHKPVANLGDLGASGEIAGTPNSSISS 119

Query: 476 XXXXXXXXXXXXKSKKNRQQKAGCEDGNXXXXXXXXXXXXXXXXXXXXXXAFMTESEVDH 655
                       KSKK+RQ K    DG                       AFMT+SEVDH
Sbjct: 120 SSTEAGAEEDSSKSKKDRQAKVSELDGGDGSKKVNKPKKKAEKRQREPRFAFMTKSEVDH 179

Query: 656 LEDGYRWRKYGQKAVKNS 709
           LEDGYRWRKYGQKAVKNS
Sbjct: 180 LEDGYRWRKYGQKAVKNS 197


>ref|XP_003532648.1| PREDICTED: probable WRKY transcription factor 28-like [Glycine max]
          Length = 371

 Score =  108 bits (269), Expect = 1e-21
 Identities = 76/191 (39%), Positives = 87/191 (45%), Gaps = 7/191 (3%)
 Frame = +2

Query: 158 NIYHEDQSGITGTSTFPMSTDPSPFHQIPSVTAN-EYQHGFDPMNMSFTDYLQGSVDYGA 334
           NI +    G    S   M         IPSV+A  +    FDP  MSFTD LQGS+DY +
Sbjct: 18  NIINNQHQGTEAGSNTTMYEKHFSSTLIPSVSAAYDSSQAFDPSYMSFTDCLQGSMDYNS 77

Query: 335 LERALDLSRSSSEVFSSIDGT------GQNTGGAIETVGSGXXXXXXXXXXXXXXXXXXX 496
           L  +  LS SSSEVFSS++G       G + GG     G                     
Sbjct: 78  LATSFGLSPSSSEVFSSVEGNQKPAEGGGDGGGGGGGSGGSETLATLNSSISSSSSEAGA 137

Query: 497 XXXXXKSKKNRQQKAGCEDGNXXXXXXXXXXXXXXXXXXXXXXAFMTESEVDHLEDGYRW 676
                KSKK RQ K   E+G                       AFMT+SEVDHLEDGYRW
Sbjct: 138 EEDSGKSKKERQVKT--EEGGENSKKGNKEKKKGEKKQKEPRFAFMTKSEVDHLEDGYRW 195

Query: 677 RKYGQKAVKNS 709
           RKYGQKAVKNS
Sbjct: 196 RKYGQKAVKNS 206


>ref|XP_002283603.1| PREDICTED: probable WRKY transcription factor 28 [Vitis vinifera]
           gi|302143547|emb|CBI22108.3| unnamed protein product
           [Vitis vinifera]
          Length = 311

 Score =  106 bits (264), Expect = 5e-21
 Identities = 79/208 (37%), Positives = 101/208 (48%), Gaps = 12/208 (5%)
 Frame = +2

Query: 122 MSDHRARDLYSLNIYHEDQSGITGTSTFPMSTD-PSPFHQIPSVTAN-EYQHGFDPMNMS 295
           MSD      Y  + +  DQ+ ++G   FP   + P+ F+Q   VT + +  H  DP  M+
Sbjct: 1   MSDENRSTPYHHDPFCHDQNRVSGAG-FPFFCEKPAIFNQ--GVTPSPQGLHATDPSYMT 57

Query: 296 FTDYLQGSVDYGALERALDLSRSSSEVFSSID-----GTGQN----TGGAIETVGSGXXX 448
           FTDYL GS+DY  L +A D+S SSSEV S +D     GT  +    T  +++T  S    
Sbjct: 58  FTDYLHGSLDYNTLSKAFDMSCSSSEVISPVDNDSGKGTASHEHPSTPNSLDTSSS---- 113

Query: 449 XXXXXXXXXXXXXXXXXXXXXKSK-KNRQQKAGCEDGNXXXXXXXXXXXXXXXXXXXXXX 625
                                KSK K   Q  GCEDG+                      
Sbjct: 114 ------------TEAITEDSGKSKHKPDLQGGGCEDGDENSKKANKSKKKGEKRPKEPRF 161

Query: 626 AFMTESEVDHLEDGYRWRKYGQKAVKNS 709
           AFMT+SE+DHLEDGYRWRKYGQKAVKNS
Sbjct: 162 AFMTKSEIDHLEDGYRWRKYGQKAVKNS 189


>ref|XP_003617423.1| WRKY transcription factor [Medicago truncatula]
           gi|355518758|gb|AET00382.1| WRKY transcription factor
           [Medicago truncatula]
          Length = 310

 Score =  105 bits (263), Expect = 7e-21
 Identities = 63/148 (42%), Positives = 76/148 (51%), Gaps = 2/148 (1%)
 Frame = +2

Query: 272 GFDPMN--MSFTDYLQGSVDYGALERALDLSRSSSEVFSSIDGTGQNTGGAIETVGSGXX 445
           GFDP +   SF+DYL GS+DY  L +A DLS SSSEV SSID        A + + S   
Sbjct: 27  GFDPSSHSTSFSDYLHGSMDYNTLSKAFDLSCSSSEVISSIDDNNTKKSSAGD-LSSLVG 85

Query: 446 XXXXXXXXXXXXXXXXXXXXXXKSKKNRQQKAGCEDGNXXXXXXXXXXXXXXXXXXXXXX 625
                                  +KK++Q K GCEDG+                      
Sbjct: 86  ISETPKSSESSSSNEAVIEEDSTNKKDKQPKLGCEDGDDEKSKKENKAKKKEKKVKEPRF 145

Query: 626 AFMTESEVDHLEDGYRWRKYGQKAVKNS 709
           AF+T+SE+DHLEDGYRWRKYGQKAVKNS
Sbjct: 146 AFLTKSEIDHLEDGYRWRKYGQKAVKNS 173


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