BLASTX nr result

ID: Coptis23_contig00041772 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041772
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEJ72555.1| putative retroelement polyprotein [Malus x domest...   112   2e-23
emb|CAN69647.1| hypothetical protein VITISV_022133 [Vitis vinifera]   110   9e-23
emb|CAN67240.1| hypothetical protein VITISV_037460 [Vitis vinifera]   110   9e-23
ref|XP_003520384.1| PREDICTED: uncharacterized protein LOC100795...   109   2e-22
emb|CAN62394.1| hypothetical protein VITISV_021305 [Vitis vinifera]   109   2e-22

>gb|AEJ72555.1| putative retroelement polyprotein [Malus x domestica]
          Length = 1249

 Score =  112 bits (281), Expect = 2e-23
 Identities = 45/84 (53%), Positives = 65/84 (77%)
 Frame = +3

Query: 27  FDLIHTDVWGPSPIPSFDGYRYYITFIDDYSRCTWLYPLKSRSDVLPTFINFMKMIQTQF 206
           F+++H+DVWGP+P+ SFDG+RY++TF+DD+SRCTWLY LKS+ +V+  F  F  ++  QF
Sbjct: 494 FEIVHSDVWGPAPLVSFDGFRYFVTFVDDFSRCTWLYLLKSKDEVINVFQEFHSLVTNQF 553

Query: 207 GVVVKSVRSDNAKEYISNHFKQHL 278
              +K +RSDN  EY+SN F Q+L
Sbjct: 554 STQLKVLRSDNGTEYMSNAFAQYL 577


>emb|CAN69647.1| hypothetical protein VITISV_022133 [Vitis vinifera]
          Length = 2655

 Score =  110 bits (276), Expect = 9e-23
 Identities = 46/82 (56%), Positives = 64/82 (78%)
 Frame = +3

Query: 24   LFDLIHTDVWGPSPIPSFDGYRYYITFIDDYSRCTWLYPLKSRSDVLPTFINFMKMIQTQ 203
            +F+LIH+DVWGPSP+ S  G RY++ FIDDYSR +W++P+KSRS++LP + NF KM++TQ
Sbjct: 1828 IFELIHSDVWGPSPVASIGGSRYFVVFIDDYSRYSWIFPMKSRSEILPIYSNFAKMVETQ 1887

Query: 204  FGVVVKSVRSDNAKEYISNHFK 269
            F   +K+ RSDNA EY    F+
Sbjct: 1888 FSKRIKTFRSDNALEYTQYVFQ 1909


>emb|CAN67240.1| hypothetical protein VITISV_037460 [Vitis vinifera]
          Length = 1174

 Score =  110 bits (276), Expect = 9e-23
 Identities = 46/82 (56%), Positives = 64/82 (78%)
 Frame = +3

Query: 24  LFDLIHTDVWGPSPIPSFDGYRYYITFIDDYSRCTWLYPLKSRSDVLPTFINFMKMIQTQ 203
           +F+LIH+DVWGPSP+ S  G RY++ FIDDYSR +W++P+KSRS++LP + NF KM++TQ
Sbjct: 356 IFELIHSDVWGPSPVASIGGSRYFVIFIDDYSRYSWIFPMKSRSEILPIYSNFAKMVETQ 415

Query: 204 FGVVVKSVRSDNAKEYISNHFK 269
           F   +K+ RSDNA EY    F+
Sbjct: 416 FSKRIKTFRSDNALEYTQYAFQ 437


>ref|XP_003520384.1| PREDICTED: uncharacterized protein LOC100795634 [Glycine max]
          Length = 1815

 Score =  109 bits (273), Expect = 2e-22
 Identities = 47/91 (51%), Positives = 65/91 (71%)
 Frame = +3

Query: 6   MHRCACLFDLIHTDVWGPSPIPSFDGYRYYITFIDDYSRCTWLYPLKSRSDVLPTFINFM 185
           + RC   F  IH+D+WGPS + SF G+RY++TFID++SRCTW+Y +K RS++LP F++F 
Sbjct: 633 VQRCDSAFSTIHSDIWGPSRVTSF-GFRYFVTFIDEFSRCTWVYLMKDRSELLPIFVSFY 691

Query: 186 KMIQTQFGVVVKSVRSDNAKEYISNHFKQHL 278
             I+ QFG  +K  RSDNAKEY S+     L
Sbjct: 692 NEIENQFGKTIKIFRSDNAKEYFSHDLSSFL 722


>emb|CAN62394.1| hypothetical protein VITISV_021305 [Vitis vinifera]
          Length = 1287

 Score =  109 bits (273), Expect = 2e-22
 Identities = 46/82 (56%), Positives = 64/82 (78%)
 Frame = +3

Query: 24  LFDLIHTDVWGPSPIPSFDGYRYYITFIDDYSRCTWLYPLKSRSDVLPTFINFMKMIQTQ 203
           +F+LIH+DVWGPSP+ S  G RY++ FIDDYSR +W++P+KSRS++L  + NF KMI+TQ
Sbjct: 504 IFELIHSDVWGPSPVASIGGSRYFVVFIDDYSRYSWIFPMKSRSEILSIYSNFAKMIETQ 563

Query: 204 FGVVVKSVRSDNAKEYISNHFK 269
           F   +K+ RSDNA EY  + F+
Sbjct: 564 FSKRIKTFRSDNALEYTQHAFQ 585


Top