BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041765
         (239 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002889372.1| ATCNGC10 [Arabidopsis lyrata subsp. lyrata] ...   114   8e-24
ref|NP_563625.1| cyclic nucleotide gated channel [Arabidopsis th...   113   2e-23
ref|NP_001184885.1| cyclic nucleotide gated channel [Arabidopsis...   113   2e-23
pir||T10541 cyclic nucleotide gated channel homolog F3I3.30 - Ar...   111   7e-23
ref|XP_002872915.1| ATCNGC13 [Arabidopsis lyrata subsp. lyrata] ...   111   7e-23

>ref|XP_002889372.1| ATCNGC10 [Arabidopsis lyrata subsp. lyrata]
           gi|297335214|gb|EFH65631.1| ATCNGC10 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 706

 Score =  114 bits (285), Expect = 8e-24
 Identities = 55/79 (69%), Positives = 64/79 (81%)
 Frame = +3

Query: 3   RYEQYKWQETRGFGGFEEEYLLRGLPKDIRRDFKLHLCLDTLRRVPMFKKMDEHLLYEIC 182
           RYEQY+WQETRG    EEE LLR LPKD+RRD K HLCLD L++VP+F+ MDE LL  +C
Sbjct: 425 RYEQYRWQETRGV---EEETLLRNLPKDLRRDIKRHLCLDLLKKVPLFEIMDEQLLDAVC 481

Query: 183 DRLKQVLYTKNSFVIGEGD 239
           DRLK VLYT+NS+VI EGD
Sbjct: 482 DRLKPVLYTENSYVIREGD 500


>ref|NP_563625.1| cyclic nucleotide gated channel [Arabidopsis thaliana]
           gi|9665147|gb|AAF97331.1|AC023628_12 Putative cyclic
           nucleotide-regulated ion channel protein [Arabidopsis
           thaliana] gi|33090209|gb|AAF76224.3|AF272002_1
           CaM-regulated potassium ion channel [Arabidopsis
           thaliana] gi|332189152|gb|AEE27273.1| cyclic nucleotide
           gated channel [Arabidopsis thaliana]
          Length = 706

 Score =  113 bits (282), Expect = 2e-23
 Identities = 54/79 (68%), Positives = 64/79 (81%)
 Frame = +3

Query: 3   RYEQYKWQETRGFGGFEEEYLLRGLPKDIRRDFKLHLCLDTLRRVPMFKKMDEHLLYEIC 182
           RYEQY+WQETRG    EEE LLR LPKD+RRD K HLCLD L++VP+F+ MDE LL  +C
Sbjct: 425 RYEQYRWQETRGV---EEETLLRNLPKDLRRDIKRHLCLDLLKKVPLFEIMDEQLLDAVC 481

Query: 183 DRLKQVLYTKNSFVIGEGD 239
           DRL+ VLYT+NS+VI EGD
Sbjct: 482 DRLRPVLYTENSYVIREGD 500


>ref|NP_001184885.1| cyclic nucleotide gated channel [Arabidopsis thaliana]
           gi|38503202|sp|Q9LNJ0.2|CNG10_ARATH RecName:
           Full=Probable cyclic nucleotide-gated ion channel 10;
           AltName: Full=CaM-regulated potassium ion channel;
           AltName: Full=Cyclic nucleotide- and
           calmodulin-regulated ion channel 10
           gi|332189153|gb|AEE27274.1| cyclic nucleotide gated
           channel [Arabidopsis thaliana]
          Length = 711

 Score =  113 bits (282), Expect = 2e-23
 Identities = 54/79 (68%), Positives = 64/79 (81%)
 Frame = +3

Query: 3   RYEQYKWQETRGFGGFEEEYLLRGLPKDIRRDFKLHLCLDTLRRVPMFKKMDEHLLYEIC 182
           RYEQY+WQETRG    EEE LLR LPKD+RRD K HLCLD L++VP+F+ MDE LL  +C
Sbjct: 430 RYEQYRWQETRGV---EEETLLRNLPKDLRRDIKRHLCLDLLKKVPLFEIMDEQLLDAVC 486

Query: 183 DRLKQVLYTKNSFVIGEGD 239
           DRL+ VLYT+NS+VI EGD
Sbjct: 487 DRLRPVLYTENSYVIREGD 505


>pir||T10541 cyclic nucleotide gated channel homolog F3I3.30 - Arabidopsis
           thaliana
          Length = 698

 Score =  111 bits (277), Expect = 7e-23
 Identities = 53/79 (67%), Positives = 62/79 (78%)
 Frame = +3

Query: 3   RYEQYKWQETRGFGGFEEEYLLRGLPKDIRRDFKLHLCLDTLRRVPMFKKMDEHLLYEIC 182
           RYEQYKWQETRG    EEE LLR LPKD+RRD K H CLD L++VP+F+ MDE LL  +C
Sbjct: 433 RYEQYKWQETRGV---EEENLLRNLPKDLRRDIKRHFCLDLLKKVPLFEIMDEQLLDAVC 489

Query: 183 DRLKQVLYTKNSFVIGEGD 239
           D+LK VLYT+NS+ I EGD
Sbjct: 490 DKLKPVLYTENSYAIREGD 508


>ref|XP_002872915.1| ATCNGC13 [Arabidopsis lyrata subsp. lyrata]
           gi|297318752|gb|EFH49174.1| ATCNGC13 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 697

 Score =  111 bits (277), Expect = 7e-23
 Identities = 53/79 (67%), Positives = 62/79 (78%)
 Frame = +3

Query: 3   RYEQYKWQETRGFGGFEEEYLLRGLPKDIRRDFKLHLCLDTLRRVPMFKKMDEHLLYEIC 182
           RYEQYKWQETRG    EEE LLR LPKD+RRD K H CLD L++VP+F+ MDE LL  +C
Sbjct: 432 RYEQYKWQETRGV---EEENLLRNLPKDLRRDIKRHFCLDLLKKVPLFEIMDEQLLDAVC 488

Query: 183 DRLKQVLYTKNSFVIGEGD 239
           D+LK VLYT+NS+ I EGD
Sbjct: 489 DKLKPVLYTENSYAIREGD 507