BLASTX nr result

ID: Coptis23_contig00041761 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041761
         (373 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513424.1| conserved hypothetical protein [Ricinus comm...    98   8e-19
gb|AAB70453.1| F19P19.16 [Arabidopsis thaliana]                        83   3e-14
sp|P93820.3|Y1439_ARATH RecName: Full=BTB/POZ domain-containing ...    83   3e-14
ref|XP_002892214.1| F19P19.16 [Arabidopsis lyrata subsp. lyrata]...    82   5e-14
emb|CBI21781.3| unnamed protein product [Vitis vinifera]               82   6e-14

>ref|XP_002513424.1| conserved hypothetical protein [Ricinus communis]
           gi|223547332|gb|EEF48827.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1016

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 53/126 (42%), Positives = 71/126 (56%), Gaps = 2/126 (1%)
 Frame = +1

Query: 1   VKAFKLTLCLAKSEQGWLTIAKTCCESVVKAIIDALGGWNSCSGKVATNQVPLLALACKL 180
           ++ F+L  CL  +EQG L +   CCE +V AIID + GW S SGK+  +++ LL  AC L
Sbjct: 283 IEGFRLAQCLMINEQGCLKVMSLCCEPIVSAIIDGMSGWTSNSGKIGNDEMSLLVEACHL 342

Query: 181 A-SITRWSGEHHTYFWKXXXXXXXXXXXXXXFYKHKQP-ESGASLKELADAARKGLDANY 354
           A  I RW+G+HH Y WK              F  H  P +   SL+E    A++GL AN+
Sbjct: 343 ALMINRWAGKHHAYLWK---LGIDQVLLDLLFDFHNGPLKLALSLQEQISLAQEGLKANF 399

Query: 355 LLVLRP 372
           LL LRP
Sbjct: 400 LLGLRP 405


>gb|AAB70453.1| F19P19.16 [Arabidopsis thaliana]
          Length = 979

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 50/124 (40%), Positives = 64/124 (51%), Gaps = 1/124 (0%)
 Frame = +1

Query: 1   VKAFKLTLCLAKSEQGWLTIAKTCCESVVKAIIDALGGWNSCSGKVATNQVPLLALACKL 180
           ++  KL   LA   +  L +   C ES+VKA +  +G W   SGK+  +Q+ LL  ACKL
Sbjct: 275 IEGLKLAQRLATGNRECLKMINMCSESLVKATVRTMGKWFLSSGKLELDQMSLLVEACKL 334

Query: 181 ASITRWSGEHHTYFWKXXXXXXXXXXXXXXFYKHKQPESG-ASLKELADAARKGLDANYL 357
           A ITRW G+HH YFWK              F  H Q   G  SL+E    A K L+AN+L
Sbjct: 335 ALITRWEGQHHIYFWKYRISEALLSLVVENF--HSQSLDGYVSLEEEVLVAEKVLNANFL 392

Query: 358 LVLR 369
             LR
Sbjct: 393 PSLR 396


>sp|P93820.3|Y1439_ARATH RecName: Full=BTB/POZ domain-containing protein At1g04390
          Length = 1002

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 50/124 (40%), Positives = 64/124 (51%), Gaps = 1/124 (0%)
 Frame = +1

Query: 1   VKAFKLTLCLAKSEQGWLTIAKTCCESVVKAIIDALGGWNSCSGKVATNQVPLLALACKL 180
           ++  KL   LA   +  L +   C ES+VKA +  +G W   SGK+  +Q+ LL  ACKL
Sbjct: 275 IEGLKLAQRLATGNRECLKMINMCSESLVKATVRTMGKWFLSSGKLELDQMSLLVEACKL 334

Query: 181 ASITRWSGEHHTYFWKXXXXXXXXXXXXXXFYKHKQPESG-ASLKELADAARKGLDANYL 357
           A ITRW G+HH YFWK              F  H Q   G  SL+E    A K L+AN+L
Sbjct: 335 ALITRWEGQHHIYFWKYRISEALLSLVVENF--HSQSLDGYVSLEEEVLVAEKVLNANFL 392

Query: 358 LVLR 369
             LR
Sbjct: 393 PSLR 396


>ref|XP_002892214.1| F19P19.16 [Arabidopsis lyrata subsp. lyrata]
           gi|297338056|gb|EFH68473.1| F19P19.16 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 978

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 51/124 (41%), Positives = 62/124 (50%), Gaps = 1/124 (0%)
 Frame = +1

Query: 1   VKAFKLTLCLAKSEQGWLTIAKTCCESVVKAIIDALGGWNSCSGKVATNQVPLLALACKL 180
           ++  KL   LA   +  L +   C ES+VKA I  +G W   SGK+  +Q+ LL  ACKL
Sbjct: 275 IEGLKLAQRLATGNRECLKMINMCSESLVKATIQTMGKWFLSSGKLEHDQMSLLVEACKL 334

Query: 181 ASITRWSGEHHTYFWKXXXXXXXXXXXXXXFYKHKQPESG-ASLKELADAARKGLDANYL 357
             ITRW G+HH YFWK              F  H Q   G  SL E    A K L+ANYL
Sbjct: 335 GLITRWEGKHHIYFWKYRISETLLSLVVENF--HSQSLDGYVSLDEEILVAEKVLNANYL 392

Query: 358 LVLR 369
             LR
Sbjct: 393 PSLR 396


>emb|CBI21781.3| unnamed protein product [Vitis vinifera]
          Length = 842

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 45/113 (39%), Positives = 60/113 (53%)
 Frame = +1

Query: 1   VKAFKLTLCLAKSEQGWLTIAKTCCESVVKAIIDALGGWNSCSGKVATNQVPLLALACKL 180
           ++AFKL   LA SEQ    + + CCE +VKAII  L G      ++A +++ LL  A  L
Sbjct: 199 IEAFKLAQLLAMSEQRCSKMMRLCCEPIVKAIICGLKGCGLSGRQIAKDRISLLVEAGHL 258

Query: 181 ASITRWSGEHHTYFWKXXXXXXXXXXXXXXFYKHKQPESGASLKELADAARKG 339
           A ITRW+GEHH YFWK               +K +QP    SL+EL     +G
Sbjct: 259 ALITRWAGEHHIYFWKLGIAGALSTLLLRKSHKAQQPPHSLSLEELTFITDEG 311


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