BLASTX nr result

ID: Coptis23_contig00041748 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041748
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280055.2| PREDICTED: LRR receptor-like serine/threonin...   127   9e-28
ref|XP_002328588.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27
ref|XP_002520403.1| serine-threonine protein kinase, plant-type,...   119   2e-25
ref|XP_002881874.1| leucine-rich repeat family protein [Arabidop...   112   3e-23
ref|NP_181808.1| receptor like protein 29 [Arabidopsis thaliana]...   112   3e-23

>ref|XP_002280055.2| PREDICTED: LRR receptor-like serine/threonine-protein kinase
           ERECTA-like [Vitis vinifera]
           gi|147832384|emb|CAN62290.1| hypothetical protein
           VITISV_017315 [Vitis vinifera]
          Length = 427

 Score =  127 bits (319), Expect = 9e-28
 Identities = 65/111 (58%), Positives = 78/111 (70%), Gaps = 2/111 (1%)
 Frame = -3

Query: 328 CKNTATFPSEIFNLPYLQSAFFYHCFTHTKTSLSIP--PRVXXXXXXXXXXXXXXXXLIG 155
           CK TATFPS++F LPYLQS FF+HCFT TKT++S+P                     L+G
Sbjct: 65  CKTTATFPSQVFTLPYLQSLFFFHCFTQTKTNISLPLLSHPSNASSLQQLSLRSNPALVG 124

Query: 154 PIPPQISLLNSLQILTLSQNNLNEQIPVQLFALTSLIHLDLSYNFLSGTIP 2
           PIP QIS L+SLQILTLSQN L  +IPVQ+F+L SL+HLDLSYN L+G IP
Sbjct: 125 PIPSQISSLHSLQILTLSQNRLAGRIPVQIFSLNSLVHLDLSYNLLTGPIP 175


>ref|XP_002328588.1| predicted protein [Populus trichocarpa] gi|222838570|gb|EEE76935.1|
           predicted protein [Populus trichocarpa]
          Length = 398

 Score =  126 bits (316), Expect = 2e-27
 Identities = 64/112 (57%), Positives = 77/112 (68%), Gaps = 3/112 (2%)
 Frame = -3

Query: 328 CKNTATFPSEIFNLPYLQSAFFYHCFTHTKTSLSIPPR---VXXXXXXXXXXXXXXXXLI 158
           CKNTA FP EIF+LP+LQS FF  CFTHTKT+LS  P                     L+
Sbjct: 75  CKNTAAFPCEIFDLPHLQSVFFSQCFTHTKTTLSASPNRGGAFFDSSLQQLSLRSNPALV 134

Query: 157 GPIPPQISLLNSLQILTLSQNNLNEQIPVQLFALTSLIHLDLSYNFLSGTIP 2
           GPIPPQIS L SL+ILTLSQN L+ +IPV++F+L SL+HLDLSYN L+G +P
Sbjct: 135 GPIPPQISFLKSLEILTLSQNRLSGRIPVEIFSLNSLVHLDLSYNMLTGPVP 186


>ref|XP_002520403.1| serine-threonine protein kinase, plant-type, putative [Ricinus
           communis] gi|223540450|gb|EEF42019.1| serine-threonine
           protein kinase, plant-type, putative [Ricinus communis]
          Length = 457

 Score =  119 bits (299), Expect = 2e-25
 Identities = 63/111 (56%), Positives = 77/111 (69%), Gaps = 2/111 (1%)
 Frame = -3

Query: 328 CKNTATFPSEIFNLPYLQSAFFYHCFTHTKTSLSIPPR--VXXXXXXXXXXXXXXXXLIG 155
           CK+ ATFP++IF+LPYLQS FF +CFTHTKT LS+     +                L G
Sbjct: 99  CKSIATFPNKIFSLPYLQSVFFLNCFTHTKTLLSVSSDGLIMFNSSLQQLSLRSNPALFG 158

Query: 154 PIPPQISLLNSLQILTLSQNNLNEQIPVQLFALTSLIHLDLSYNFLSGTIP 2
           PIP Q SLL SLQILTLSQN+L+  IPV +F+L+SL+HLDLSYN L+G IP
Sbjct: 159 PIPHQFSLLKSLQILTLSQNHLSGPIPVGIFSLSSLVHLDLSYNMLTGAIP 209


>ref|XP_002881874.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297327713|gb|EFH58133.1| leucine-rich repeat
           family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 468

 Score =  112 bits (280), Expect = 3e-23
 Identities = 57/109 (52%), Positives = 73/109 (66%)
 Frame = -3

Query: 328 CKNTATFPSEIFNLPYLQSAFFYHCFTHTKTSLSIPPRVXXXXXXXXXXXXXXXXLIGPI 149
           CK++A+FPS IF+LP+LQS FF++CFTH  T++  P ++                L G I
Sbjct: 97  CKSSASFPSSIFSLPFLQSVFFFNCFTHFPTTIIFPIKLLPNSSLQQLSLRSNPSLSGQI 156

Query: 148 PPQISLLNSLQILTLSQNNLNEQIPVQLFALTSLIHLDLSYNFLSGTIP 2
           PP+IS L SLQILTLSQN L   IP  +F+L SL+HLDLSYN L+G IP
Sbjct: 157 PPRISSLKSLQILTLSQNRLTGDIPPAIFSLKSLVHLDLSYNKLTGKIP 205


>ref|NP_181808.1| receptor like protein 29 [Arabidopsis thaliana]
           gi|4512674|gb|AAD21728.1| hypothetical protein
           [Arabidopsis thaliana] gi|66792706|gb|AAY56455.1|
           At2g42800 [Arabidopsis thaliana]
           gi|330255076|gb|AEC10170.1| receptor like protein 29
           [Arabidopsis thaliana]
          Length = 462

 Score =  112 bits (280), Expect = 3e-23
 Identities = 57/109 (52%), Positives = 72/109 (66%)
 Frame = -3

Query: 328 CKNTATFPSEIFNLPYLQSAFFYHCFTHTKTSLSIPPRVXXXXXXXXXXXXXXXXLIGPI 149
           CK++A+FPS IF LP+LQS FF++CFTH  T++  P ++                L G I
Sbjct: 98  CKSSASFPSSIFTLPFLQSVFFFNCFTHFPTTIMFPIKLIPNSSLQQLSLRSNPSLSGQI 157

Query: 148 PPQISLLNSLQILTLSQNNLNEQIPVQLFALTSLIHLDLSYNFLSGTIP 2
           PP+IS L SLQILTLSQN L   IP  +F+L SL+HLDLSYN L+G IP
Sbjct: 158 PPRISSLKSLQILTLSQNRLTGDIPPAIFSLKSLVHLDLSYNKLTGKIP 206


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