BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041747
         (299 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADN34130.1| ubiquitin-protein ligase [Cucumis melo subsp. melo]     72   6e-11
ref|XP_004145529.1| PREDICTED: F-box protein SKIP23-like [Cucumi...    67   2e-09
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...    66   3e-09
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...    65   7e-09
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]    65   7e-09

>gb|ADN34130.1| ubiquitin-protein ligase [Cucumis melo subsp. melo]
          Length = 392

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 42/99 (42%), Positives = 62/99 (62%), Gaps = 2/99 (2%)
 Frame = +3

Query: 3   SPSITLINPLTTTQMQLPPMTNFPGVL*YNPEIIGREFVVWVQESCEFF-NFDRMNNFFI 179
           +PSI L+NPLT  + +LPP++ FP V+ ++   +GRE+++       +  N  +M + F+
Sbjct: 101 TPSILLLNPLTRAKFRLPPLSTFPNVVSFDYSRVGREYLIRTPTGHIYTRNLRQMRDSFV 160

Query: 180 DKLVLSSSPSGKN-CLAVAIVFHENSRKLACCRLGDERW 293
            K+VLSSSPS +N  LAVAI+ H  S  LA CR G   W
Sbjct: 161 KKIVLSSSPSNQNDFLAVAILNH--SGDLAFCRSGGGSW 197


>ref|XP_004145529.1| PREDICTED: F-box protein SKIP23-like [Cucumis sativus]
           gi|449485151|ref|XP_004157083.1| PREDICTED: F-box
           protein SKIP23-like [Cucumis sativus]
          Length = 392

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 40/99 (40%), Positives = 59/99 (59%), Gaps = 2/99 (2%)
 Frame = +3

Query: 3   SPSITLINPLTTTQMQLPPMTNFPGVL*YNPEIIGREFVVWVQESCEFF-NFDRMNNFFI 179
           +P I L+NP T  ++ LPP++ FP V+ ++   +GRE+++       +  N  +M + F+
Sbjct: 101 TPPILLLNPFTRAKLWLPPLSTFPNVVSFDYSRVGREYLIRTPTGHIYTRNLRQMRDSFV 160

Query: 180 DKLVLSSSPSGKN-CLAVAIVFHENSRKLACCRLGDERW 293
            K+VLSSSPS  N  LAVAI+ H  S  LA CR G   W
Sbjct: 161 KKIVLSSSPSNPNDFLAVAILNH--SGDLAFCRSGGGSW 197


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 38/98 (38%), Positives = 58/98 (59%), Gaps = 1/98 (1%)
 Frame = +3

Query: 3   SPSITLINPLTTTQMQLPPMTNFPGVL*YNPEIIGREFVVW-VQESCEFFNFDRMNNFFI 179
           +P+I LINPLT  ++ LPP+++FP V+ +N   IGRE+ +  +       +  +M + FI
Sbjct: 106 TPTILLINPLTRAKLSLPPLSSFPNVISFNYSDIGREYALRNLLGERVTVSLRQMRDSFI 165

Query: 180 DKLVLSSSPSGKNCLAVAIVFHENSRKLACCRLGDERW 293
            K+VLSSSP   N   V  + ++    LA CR GD+ W
Sbjct: 166 RKVVLSSSPLKDNNFVVIAILNQTD-DLAYCRNGDKSW 202


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 34/98 (34%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
 Frame = +3

Query: 3   SPSITLINPLTTTQMQLPPMTNFPGVL*YNPEIIGREFVVWVQESCEFF-NFDRMNNFFI 179
           +P I L+NPLT +++ LPP++ FP V+ +N   +GRE+ +       +  +  +M + FI
Sbjct: 103 APEIFLLNPLTRSKVHLPPLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFI 162

Query: 180 DKLVLSSSPSGKNCLAVAIVFHENSRKLACCRLGDERW 293
            K +LSSSP+  +   +A+V    +  LA CR  D+ W
Sbjct: 163 KKTILSSSPANGSDF-IAVVILNQTGDLALCRKSDDSW 199


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 34/98 (34%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
 Frame = +3

Query: 3   SPSITLINPLTTTQMQLPPMTNFPGVL*YNPEIIGREFVVWVQESCEFF-NFDRMNNFFI 179
           +P I L+NPLT +++ LPP++ FP V+ +N   +GRE+ +       +  +  +M + FI
Sbjct: 103 APEIFLLNPLTRSKVHLPPLSTFPNVVRFNFADVGREYALRTSSGDVYTRSLKKMRDSFI 162

Query: 180 DKLVLSSSPSGKNCLAVAIVFHENSRKLACCRLGDERW 293
            K +LSSSP+  +   +A+V    +  LA CR  D+ W
Sbjct: 163 KKTILSSSPANGSDF-IAVVILNQTGDLALCRKSDDSW 199