BLASTX nr result

ID: Coptis23_contig00041745 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis23_contig00041745
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301530.1| gibberellin 2-oxidase [Populus trichocarpa] ...    64   1e-08
ref|XP_002320960.1| gibberellin 2-oxidase [Populus trichocarpa] ...    59   5e-07
ref|XP_002515236.1| gibberellin 2-oxidase, putative [Ricinus com...    57   1e-06
gb|AAT92093.1| GA 2-oxidase 1 [Nerium oleander]                        56   3e-06
emb|CBI36990.3| unnamed protein product [Vitis vinifera]               56   3e-06

>ref|XP_002301530.1| gibberellin 2-oxidase [Populus trichocarpa]
           gi|222843256|gb|EEE80803.1| gibberellin 2-oxidase
           [Populus trichocarpa]
          Length = 322

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 33/71 (46%), Positives = 41/71 (57%)
 Frame = +2

Query: 41  NEPLSFHCVVNDYMEAVRNLACEILELMTEGLHVHDNKCVXXXXXXXXXXXXXXXXNHYP 220
           N+P  F CVVNDY++AV+ LACEIL+L  EGL V D K                  NHYP
Sbjct: 121 NDPSEFSCVVNDYIQAVKQLACEILDLTAEGLWVPD-KRAFSRFIRDVHSDSVLRLNHYP 179

Query: 221 PYKDIMDTSPS 253
            +++IMD  PS
Sbjct: 180 AFEEIMDWDPS 190


>ref|XP_002320960.1| gibberellin 2-oxidase [Populus trichocarpa]
           gi|222861733|gb|EEE99275.1| gibberellin 2-oxidase
           [Populus trichocarpa]
          Length = 322

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 32/71 (45%), Positives = 38/71 (53%)
 Frame = +2

Query: 41  NEPLSFHCVVNDYMEAVRNLACEILELMTEGLHVHDNKCVXXXXXXXXXXXXXXXXNHYP 220
           N+P  F C V+DY+ AVR LACEIL+L  EGL V D K V                NHYP
Sbjct: 121 NDPSGFSCAVSDYIRAVRQLACEILDLAAEGLWVPD-KHVFSRLIRDVHSDSVLRLNHYP 179

Query: 221 PYKDIMDTSPS 253
             ++I D  PS
Sbjct: 180 AVEEIADWDPS 190


>ref|XP_002515236.1| gibberellin 2-oxidase, putative [Ricinus communis]
           gi|223545716|gb|EEF47220.1| gibberellin 2-oxidase,
           putative [Ricinus communis]
          Length = 333

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 32/71 (45%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
 Frame = +2

Query: 44  EPLSFHCVVNDYMEAVRNLACEILELMTEGLHVHDNKCVXXXXXXXXXXXXXXXXNHYP- 220
           +P  F C VNDY+E VR LACEIL+L+ EGL + D K V                NHYP 
Sbjct: 122 DPAKFSCAVNDYIEEVRELACEILDLLGEGLWMKD-KFVFSRLIRDVHSDSVLRLNHYPS 180

Query: 221 PYKDIMDTSPS 253
             K++MD  PS
Sbjct: 181 AVKEVMDWDPS 191


>gb|AAT92093.1| GA 2-oxidase 1 [Nerium oleander]
          Length = 339

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 32/72 (44%), Positives = 37/72 (51%)
 Frame = +2

Query: 41  NEPLSFHCVVNDYMEAVRNLACEILELMTEGLHVHDNKCVXXXXXXXXXXXXXXXXNHYP 220
           N+P  F   V+ Y+ AVR LACEIL+L+ EGL V D   V                NHYP
Sbjct: 119 NDPTKFSSAVSSYVAAVRELACEILDLIGEGLRVPDTS-VFSKLIKDVESDSLLRLNHYP 177

Query: 221 PYKDIMDTSPSS 256
           P     DTSPSS
Sbjct: 178 PLHRDRDTSPSS 189


>emb|CBI36990.3| unnamed protein product [Vitis vinifera]
          Length = 334

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 28/70 (40%), Positives = 36/70 (51%)
 Frame = +2

Query: 41  NEPLSFHCVVNDYMEAVRNLACEILELMTEGLHVHDNKCVXXXXXXXXXXXXXXXXNHYP 220
           N+P  F C V DY++ VR L CEIL+L+ EGL + D K V                NHYP
Sbjct: 121 NDPTEFSCAVTDYIQGVRELCCEILDLIGEGLWLQD-KMVFSRMIRDVHSDSVIRVNHYP 179

Query: 221 PYKDIMDTSP 250
             KD+ +  P
Sbjct: 180 AVKDVKEWDP 189


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