BLASTX nr result
ID: Coptis23_contig00041745
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis23_contig00041745 (258 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002301530.1| gibberellin 2-oxidase [Populus trichocarpa] ... 64 1e-08 ref|XP_002320960.1| gibberellin 2-oxidase [Populus trichocarpa] ... 59 5e-07 ref|XP_002515236.1| gibberellin 2-oxidase, putative [Ricinus com... 57 1e-06 gb|AAT92093.1| GA 2-oxidase 1 [Nerium oleander] 56 3e-06 emb|CBI36990.3| unnamed protein product [Vitis vinifera] 56 3e-06 >ref|XP_002301530.1| gibberellin 2-oxidase [Populus trichocarpa] gi|222843256|gb|EEE80803.1| gibberellin 2-oxidase [Populus trichocarpa] Length = 322 Score = 63.9 bits (154), Expect = 1e-08 Identities = 33/71 (46%), Positives = 41/71 (57%) Frame = +2 Query: 41 NEPLSFHCVVNDYMEAVRNLACEILELMTEGLHVHDNKCVXXXXXXXXXXXXXXXXNHYP 220 N+P F CVVNDY++AV+ LACEIL+L EGL V D K NHYP Sbjct: 121 NDPSEFSCVVNDYIQAVKQLACEILDLTAEGLWVPD-KRAFSRFIRDVHSDSVLRLNHYP 179 Query: 221 PYKDIMDTSPS 253 +++IMD PS Sbjct: 180 AFEEIMDWDPS 190 >ref|XP_002320960.1| gibberellin 2-oxidase [Populus trichocarpa] gi|222861733|gb|EEE99275.1| gibberellin 2-oxidase [Populus trichocarpa] Length = 322 Score = 58.5 bits (140), Expect = 5e-07 Identities = 32/71 (45%), Positives = 38/71 (53%) Frame = +2 Query: 41 NEPLSFHCVVNDYMEAVRNLACEILELMTEGLHVHDNKCVXXXXXXXXXXXXXXXXNHYP 220 N+P F C V+DY+ AVR LACEIL+L EGL V D K V NHYP Sbjct: 121 NDPSGFSCAVSDYIRAVRQLACEILDLAAEGLWVPD-KHVFSRLIRDVHSDSVLRLNHYP 179 Query: 221 PYKDIMDTSPS 253 ++I D PS Sbjct: 180 AVEEIADWDPS 190 >ref|XP_002515236.1| gibberellin 2-oxidase, putative [Ricinus communis] gi|223545716|gb|EEF47220.1| gibberellin 2-oxidase, putative [Ricinus communis] Length = 333 Score = 57.4 bits (137), Expect = 1e-06 Identities = 32/71 (45%), Positives = 39/71 (54%), Gaps = 1/71 (1%) Frame = +2 Query: 44 EPLSFHCVVNDYMEAVRNLACEILELMTEGLHVHDNKCVXXXXXXXXXXXXXXXXNHYP- 220 +P F C VNDY+E VR LACEIL+L+ EGL + D K V NHYP Sbjct: 122 DPAKFSCAVNDYIEEVRELACEILDLLGEGLWMKD-KFVFSRLIRDVHSDSVLRLNHYPS 180 Query: 221 PYKDIMDTSPS 253 K++MD PS Sbjct: 181 AVKEVMDWDPS 191 >gb|AAT92093.1| GA 2-oxidase 1 [Nerium oleander] Length = 339 Score = 56.2 bits (134), Expect = 3e-06 Identities = 32/72 (44%), Positives = 37/72 (51%) Frame = +2 Query: 41 NEPLSFHCVVNDYMEAVRNLACEILELMTEGLHVHDNKCVXXXXXXXXXXXXXXXXNHYP 220 N+P F V+ Y+ AVR LACEIL+L+ EGL V D V NHYP Sbjct: 119 NDPTKFSSAVSSYVAAVRELACEILDLIGEGLRVPDTS-VFSKLIKDVESDSLLRLNHYP 177 Query: 221 PYKDIMDTSPSS 256 P DTSPSS Sbjct: 178 PLHRDRDTSPSS 189 >emb|CBI36990.3| unnamed protein product [Vitis vinifera] Length = 334 Score = 56.2 bits (134), Expect = 3e-06 Identities = 28/70 (40%), Positives = 36/70 (51%) Frame = +2 Query: 41 NEPLSFHCVVNDYMEAVRNLACEILELMTEGLHVHDNKCVXXXXXXXXXXXXXXXXNHYP 220 N+P F C V DY++ VR L CEIL+L+ EGL + D K V NHYP Sbjct: 121 NDPTEFSCAVTDYIQGVRELCCEILDLIGEGLWLQD-KMVFSRMIRDVHSDSVIRVNHYP 179 Query: 221 PYKDIMDTSP 250 KD+ + P Sbjct: 180 AVKDVKEWDP 189